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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18094717   linoleate 13S-lipoxygenase 3-1, chloroplastic 
 ppo-r.4   18094717   linoleate 13S-lipoxygenase 3-1, chloroplastic 
 ppo-u.5   7477038   lipoxygenase 6, chloroplastic 
 ppo-u.5   7494782   lipoxygenase 6, chloroplastic 
 ppo-u.5   7475684   linoleate 13S-lipoxygenase 3-1, chloroplastic 
 gma-u.5   100814410   lipoxygenase 6, chloroplastic 
 gma-u.5   100817322   linoleate 13S-lipoxygenase 3-1, chloroplastic 
 gma-u.5   100785480   lipoxygenase 3, chloroplastic 
 mtr-u.5   11430427   linoleate 13S-lipoxygenase 3-1, chloroplastic 
 mtr-u.5   25501722   lipoxygenase 6, chloroplastic 
 ath-u.5   LOX3   lipoxygenase 3 
 ath-u.5   LOX6   PLAT/LH2 domain-containing lipoxygenase family protein 
 ath-u.5   LOX4   PLAT/LH2 domain-containing lipoxygenase family protein 
 vvi-u.5   100244202   lipoxygenase 6, chloroplastic 
 vvi-u.5   LOXO   lipoxygenase 
 sly-u.5   101263024   lipoxygenase 6, chloroplastic 
 sly-u.5   loxD   linoleate 13S-lipoxygenase 3-1, chloroplastic 
 osa-u.5   4331824   probable lipoxygenase 6 
 osa-u.5   9267158   putative lipoxygenase 5 
 zma-u.5   lox9   linoleate 13S-lipoxygenase9 
 zma-u.5   lox7   linoleate 13S-lipoxygenase7 
 zma-u.5   ts1   tasselseed1 

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Top 50 coexpressed genes to 18094717 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18094717 (ppo-u.5 coexpression data)

CoexMap"18094717"


ppoLOC18094717 | Entrez gene ID : 18094717    
Species ppo gma mtr ath vvi sly osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 5 3 2 3 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00591 [list] [network] Linoleic acid metabolism (21 genes)
pop00592 [list] [network] alpha-Linolenic acid metabolism (75 genes)
GO BP
GO:0034440 [list] [network] lipid oxidation  (46 genes)  IEA  
GO CC
GO MF
GO:0016702 [list] [network] oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen  (54 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (2135 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_006369132.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 2,  chlo 1,  plas 1  (predict for XP_006369132.1)
Subcellular
localization
TargetP
chlo 7,  other 3  (predict for XP_006369132.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18094717
ppo-r.4
for
18094717
ppo-u.5
for
7477038
ppo-u.5
for
7494782
ppo-u.5
for
7475684
gma-u.5
for
100814410
gma-u.5
for
100817322
gma-u.5
for
100785480
mtr-u.5
for
11430427
mtr-u.5
for
25501722
ath-u.5
for
LOX3
ath-u.5
for
LOX6
ath-u.5
for
LOX4
vvi-u.5
for
100244202
vvi-u.5
for
LOXO
sly-u.5
for
101263024
sly-u.5
for
loxD
osa-u.5
for
4331824
osa-u.5
for
9267158
zma-u.5
for
lox9
zma-u.5
for
lox7
zma-u.5
for
ts1


Ortholog ID: 1772
Species ppo ppo gma gma mtr mtr ath ath bra bra vvi ghi ghi bna bna cit cit sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC7477038 LOC18094717 LOC100793614 LOC100811820 LOC25501722 LOC11430427 LOX4 LOX6 LOC103835956 LOC103852410 LOC100244202 LOC121230896 LOC107886453 LOC125585696 LOC106358574 LOC102620930 LOC102622489 loxD LOC101263024 LOC102597498 LOC102583480 LOC107814671 LOC107820064 LOC4331824 LOC9267158 lox9 lox7 LOC123098654 LOC123189338 LOC123449608 LOC123426843 LOC8065835 LOC8082015 LOC100831197 LOC100829163
Function* lipoxygenase 6, chloroplastic linoleate 13S-lipoxygenase 3-1, chloroplastic linoleate 13S-lipoxygenase 3-1, chloroplastic linoleate 13S-lipoxygenase 3-1, chloroplastic lipoxygenase 6, chloroplastic linoleate 13S-lipoxygenase 3-1, chloroplastic PLAT/LH2 domain-containing lipoxygenase family protein PLAT/LH2 domain-containing lipoxygenase family protein lipoxygenase 3, chloroplastic lipoxygenase 6, chloroplastic lipoxygenase 6, chloroplastic linoleate 13S-lipoxygenase 3-1, chloroplastic lipoxygenase 6, chloroplastic lipoxygenase 6, chloroplastic-like lipoxygenase 3, chloroplastic lipoxygenase 6, chloroplastic linoleate 13S-lipoxygenase 3-1, chloroplastic-like linoleate 13S-lipoxygenase 3-1, chloroplastic lipoxygenase 6, chloroplastic linoleate 13S-lipoxygenase 3-1, chloroplastic-like lipoxygenase 6, chloroplastic-like linoleate 13S-lipoxygenase 3-1, chloroplastic lipoxygenase 6, chloroplastic probable lipoxygenase 6 putative lipoxygenase 5 linoleate 13S-lipoxygenase9 linoleate 13S-lipoxygenase7 probable lipoxygenase 6 putative lipoxygenase 5 probable lipoxygenase 6 putative lipoxygenase 5 putative lipoxygenase 5 probable lipoxygenase 6 putative lipoxygenase 5 probable lipoxygenase 6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00591 Linoleic acid metabolism 3
ppo00592 alpha-Linolenic acid metabolism 2
ppo00900 Terpenoid backbone biosynthesis 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00592 alpha-Linolenic acid metabolism 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 2
gma00591 Linoleic acid metabolism 2
gma00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00591 Linoleic acid metabolism 2
gma00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00196 Photosynthesis - antenna proteins 3
mtr00500 Starch and sucrose metabolism 3
mtr01200 Carbon metabolism 3
mtr00195 Photosynthesis 2
mtr00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 5
mtr04016 MAPK signaling pathway - plant 4
mtr04075 Plant hormone signal transduction 4
mtr00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00592 alpha-Linolenic acid metabolism 5
ath04075 Plant hormone signal transduction 5
ath00591 Linoleic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00460 Cyanoamino acid metabolism 2
ath00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00592 alpha-Linolenic acid metabolism 6
bra04075 Plant hormone signal transduction 5
bra00591 Linoleic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 4
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04082 Neuroactive ligand signaling 4
ghi00591 Linoleic acid metabolism 2
ghi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00591 Linoleic acid metabolism 3
ghi00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00591 Linoleic acid metabolism 4
bna00592 alpha-Linolenic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00591 Linoleic acid metabolism 6
bna00592 alpha-Linolenic acid metabolism 6
bna04075 Plant hormone signal transduction 4
bna04626 Plant-pathogen interaction 4
bna00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 4
sly00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 3
sot04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00592 alpha-Linolenic acid metabolism 5
sot00591 Linoleic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00591 Linoleic acid metabolism 2
nta00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00592 alpha-Linolenic acid metabolism 5
nta04075 Plant hormone signal transduction 4
nta00591 Linoleic acid metabolism 3
nta00071 Fatty acid degradation 2
nta00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00592 alpha-Linolenic acid metabolism 4
osa00280 Valine, leucine and isoleucine degradation 2
osa04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
osa00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 3
zma04070 Phosphatidylinositol signaling system 3
zma00591 Linoleic acid metabolism 2
zma00562 Inositol phosphate metabolism 2
zma00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00592 alpha-Linolenic acid metabolism 5
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
zma01230 Biosynthesis of amino acids 2
zma00591 Linoleic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00591 Linoleic acid metabolism 3
tae00592 alpha-Linolenic acid metabolism 3
tae04626 Plant-pathogen interaction 3
tae03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
tae04626 Plant-pathogen interaction 3
tae00591 Linoleic acid metabolism 3
tae00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 6
hvu00941 Flavonoid biosynthesis 3
hvu00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
hvu00360 Phenylalanine metabolism 3
hvu00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 3
hvu00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7477038 18094717 100793614 100811820 25501722 11430427 843584 843077 103835956 103852410 100244202 121230896 107886453 125585696 106358574 102620930 102622489 544009 101263024 102597498 102583480 107814671 107820064 4331824 9267158 100037806 100037807 123098654 123189338 123449608 123426843 8065835 8082015 100831197 100829163
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