Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18104862   polyadenylate-binding protein 2 
 ppo-r.4   18104862   polyadenylate-binding protein 2 
 ppo-u.5   7492048   polyadenylate-binding protein 8 
 ppo-u.5   7467793   polyadenylate-binding protein 3 
 gma-u.5   100780329   polyadenylate-binding protein 2 
 gma-u.5   100778879   polyadenylate-binding protein 8 
 gma-u.5   100813735   polyadenylate-binding protein 2 
 mtr-u.5   11419187   polyadenylate-binding protein 2 
 ath-u.5   PAB4   poly(A) binding protein 4 
 bra-r.6   103864463   polyadenylate-binding protein 4 
 bra-r.6   103871402   polyadenylate-binding protein 8 
 bra-r.6   103830833   polyadenylate-binding protein 5 
 vvi-u.5   100255846   polyadenylate-binding protein 2-like 
 vvi-u.5   100262903   polyadenylate-binding protein 2 
 vvi-u.5   100263065   polyadenylate-binding protein 3 
 ghi-r.1   107901761   polyadenylate-binding protein 3 
 ghi-r.1   107903180   polyadenylate-binding protein 2 
 ghi-r.1   107908893   polyadenylate-binding protein 8 
 bna-r.1   111204605   polyadenylate-binding protein 2-like 
 bna-r.1   125596826   polyadenylate-binding protein 2-like 
 bna-r.1   106361048   polyadenylate-binding protein 2 
 cit-r.1   102616823   polyadenylate-binding protein 2-like 
 cit-r.1   PABP2   poly A-binding protein 2 
 cit-r.1   102615487   polyadenylate-binding protein 3 
 sly-u.5   101258105   polyadenylate-binding protein 8-like 
 sly-u.5   101261596   polyadenylate-binding protein 2-like 
 sly-u.5   101264108   polyadenylate-binding protein 3 
 sot-r.1   102585145   polyadenylate-binding protein 8-like 
 sot-r.1   102580924   polyadenylate-binding protein 2-like 
 nta-r.1   107761991   polyadenylate-binding protein 2-like 
 nta-r.1   107784553   polyadenylate-binding protein 8-like 
 osa-u.5   4345242   polyadenylate-binding protein 2 
 osa-u.5   4336331   polyadenylate-binding protein 2 
 osa-u.5   4341408   polyadenylate-binding protein 5 
 zma-u.5   100383542   uncharacterized LOC100383542 
 zma-u.5   103641822   polyadenylate-binding protein 2 
 zma-u.5   100502035   uncharacterized LOC100502035 
 tae-r.2   123053837   polyadenylate-binding protein 2 
 tae-r.2   123111491   polyadenylate-binding protein 8 
 hvu-r.1   123411286   polyadenylate-binding protein 2-like 
 hvu-r.1   123427184   polyadenylate-binding protein 2-like 
 hvu-r.1   123398305   polyadenylate-binding protein 8-like 
 sbi-r.1   8075901   polyadenylate-binding protein 2 
 sbi-r.1   110432373   polyadenylate-binding protein 2-like 
 bdi-r.1   100829057   polyadenylate-binding protein 2 
 bdi-r.1   100827201   polyadenylate-binding protein 2 
 cre-r.1   CHLRE_01g039300v5   uncharacterized protein 

close


Top 50 coexpressed genes to 18104862 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 18104862 (ppo-u.5 coexpression data)

CoexMap"18104862"


ppoLOC18104862 | Entrez gene ID : 18104862    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 1 1 3 3 3 3 3 3 2 2 3 3 2 3 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03015 [list] [network] mRNA surveillance pathway (164 genes)
pop03018 [list] [network] RNA degradation (133 genes)
GO BP
GO CC
GO:1990904 [list] [network] ribonucleoprotein complex  (740 genes)  IEA  
GO:0005829 [list] [network] cytosol  (1141 genes)  IEA  
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0003730 [list] [network] mRNA 3'-UTR binding  (2 genes)  IEA  
GO:0008266 [list] [network] poly(U) RNA binding  (2 genes)  IEA  
GO:0008143 [list] [network] poly(A) binding  (6 genes)  IEA  
Protein XP_006374904.1 [sequence] [blastp]
Subcellular
localization
wolf
pero 4,  cyto 2,  extr 2,  chlo 1,  nucl 1,  E.R. 1  (predict for XP_006374904.1)
Subcellular
localization
TargetP
other 6  (predict for XP_006374904.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18104862
ppo-r.4
for
18104862
ppo-u.5
for
7492048
ppo-u.5
for
7467793
gma-u.5
for
100780329
gma-u.5
for
100778879
gma-u.5
for
100813735
mtr-u.5
for
11419187
ath-u.5
for
PAB4
bra-r.6
for
103864463
bra-r.6
for
103871402
bra-r.6
for
103830833
vvi-u.5
for
100255846
vvi-u.5
for
100262903
vvi-u.5
for
100263065
ghi-r.1
for
107901761
ghi-r.1
for
107903180
ghi-r.1
for
107908893
bna-r.1
for
111204605
bna-r.1
for
125596826
bna-r.1
for
106361048
cit-r.1
for
102616823
cit-r.1
for
PABP2
cit-r.1
for
102615487
sly-u.5
for
101258105
sly-u.5
for
101261596
sly-u.5
for
101264108
sot-r.1
for
102585145
sot-r.1
for
102580924
nta-r.1
for
107761991
nta-r.1
for
107784553
osa-u.5
for
4345242
osa-u.5
for
4336331
osa-u.5
for
4341408
zma-u.5
for
100383542
zma-u.5
for
103641822
zma-u.5
for
100502035
tae-r.2
for
123053837
tae-r.2
for
123111491
hvu-r.1
for
123411286
hvu-r.1
for
123427184
hvu-r.1
for
123398305
sbi-r.1
for
8075901
sbi-r.1
for
110432373
bdi-r.1
for
100829057
bdi-r.1
for
100827201
cre-r.1
for
CHLRE_01g039300v5


Ortholog ID: 542
Species ppo ppo gma gma gma mtr ath bra bra vvi vvi vvi ghi ghi ghi bna bna bna cit cit cit sly sly sly sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi bdi bdi bdi cre
Symbol LOC18104862 LOC7467793 LOC100780329 LOC100798998 LOC100784442 LOC11429679 PAB2 LOC103830833 LOC103844362 LOC100255846 LOC100263065 LOC100241923 LOC107908893 LOC107935017 LOC107894289 LOC106381077 LOC106432291 LOC106391056 PABP2 LOC102615487 LOC102628035 LOC101258105 LOC101261596 LOC101264108 LOC102585145 LOC102580924 LOC107809091 LOC107813138 LOC107814429 LOC4345242 LOC4341408 LOC4346409 LOC100383542 LOC100502035 LOC100381531 LOC123053837 LOC123157268 LOC123154688 LOC123411286 LOC123427184 LOC123398305 LOC8075901 LOC110432373 LOC100829057 LOC100827201 LOC100828713 CHLRE_01g039300v5
Function* polyadenylate-binding protein 2 polyadenylate-binding protein 3 polyadenylate-binding protein 2 polyadenylate-binding protein 3 polyadenylate-binding protein 2 polyadenylate-binding protein 2 poly(A) binding protein 2 polyadenylate-binding protein 5 polyadenylate-binding protein 2 polyadenylate-binding protein 2-like polyadenylate-binding protein 3 polyadenylate-binding protein 2-like polyadenylate-binding protein 8 polyadenylate-binding protein 8 polyadenylate-binding protein 8 polyadenylate-binding protein 5-like polyadenylate-binding protein 5-like polyadenylate-binding protein 4 poly A-binding protein 2 polyadenylate-binding protein 3 polyadenylate-binding protein 2-like polyadenylate-binding protein 8-like polyadenylate-binding protein 2-like polyadenylate-binding protein 3 polyadenylate-binding protein 8-like polyadenylate-binding protein 2-like polyadenylate-binding protein 3-like polyadenylate-binding protein 2 polyadenylate-binding protein 2 polyadenylate-binding protein 2 polyadenylate-binding protein 5 polyadenylate-binding protein 2 uncharacterized LOC100383542 uncharacterized LOC100502035 Polyadenylate-binding protein 2 polyadenylate-binding protein 2 polyadenylate-binding protein 2 polyadenylate-binding protein 2 polyadenylate-binding protein 2-like polyadenylate-binding protein 2-like polyadenylate-binding protein 8-like polyadenylate-binding protein 2 polyadenylate-binding protein 2-like polyadenylate-binding protein 2 polyadenylate-binding protein 2 polyadenylate-binding protein 2 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo03015 mRNA surveillance pathway 4
ppo03018 RNA degradation 4
ppo01210 2-Oxocarboxylic acid metabolism 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
gma03015 mRNA surveillance pathway 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 5
ath00620 Pyruvate metabolism 4
ath00190 Oxidative phosphorylation 4
ath00020 Citrate cycle (TCA cycle) 3
ath03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
vvi00970 Aminoacyl-tRNA biosynthesis 3
vvi03015 mRNA surveillance pathway 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 4
vvi00190 Oxidative phosphorylation 2
vvi04142 Lysosome 2
vvi04145 Phagosome 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 6
vvi03015 mRNA surveillance pathway 2
vvi03018 RNA degradation 2
vvi03010 Ribosome 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 4
ghi03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 4
ghi03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 4
ghi03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 4
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 4
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00250 Alanine, aspartate and glutamate metabolism 7
bna00230 Purine metabolism 5
bna01232 Nucleotide metabolism 5
bna01240 Biosynthesis of cofactors 5
bna03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit03015 mRNA surveillance pathway 2
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 6
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 3
sot01240 Biosynthesis of cofactors 3
sot00190 Oxidative phosphorylation 3
sot04145 Phagosome 3
sot01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
sot01230 Biosynthesis of amino acids 2
sot03015 mRNA surveillance pathway 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
nta01230 Biosynthesis of amino acids 2
nta03015 mRNA surveillance pathway 2
nta03018 RNA degradation 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 5
osa04141 Protein processing in endoplasmic reticulum 3
osa03018 RNA degradation 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 3
osa03018 RNA degradation 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 13
osa03015 mRNA surveillance pathway 4
osa03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
zma03018 RNA degradation 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 5
zma00970 Aminoacyl-tRNA biosynthesis 3
zma03015 mRNA surveillance pathway 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 5
zma03015 mRNA surveillance pathway 4
zma03010 Ribosome 3
zma00970 Aminoacyl-tRNA biosynthesis 2
zma00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 6
tae03015 mRNA surveillance pathway 4
tae01230 Biosynthesis of amino acids 4
tae03018 RNA degradation 3
tae00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 10
tae03018 RNA degradation 3
tae04814 Motor proteins 3
tae03013 Nucleocytoplasmic transport 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 6
tae03018 RNA degradation 3
tae04814 Motor proteins 3
tae03013 Nucleocytoplasmic transport 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 4
hvu00020 Citrate cycle (TCA cycle) 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 4
sbi03010 Ribosome 2
sbi03015 mRNA surveillance pathway 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 7
sbi00970 Aminoacyl-tRNA biosynthesis 3
sbi03015 mRNA surveillance pathway 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 3
bdi03010 Ribosome 3
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 14
bdi03015 mRNA surveillance pathway 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 6
bdi03015 mRNA surveillance pathway 4
bdi03018 RNA degradation 3
bdi04120 Ubiquitin mediated proteolysis 2
bdi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 11
cre01230 Biosynthesis of amino acids 6
cre01210 2-Oxocarboxylic acid metabolism 3
cre03013 Nucleocytoplasmic transport 2
cre00290 Valine, leucine and isoleucine biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 18104862 7467793 100780329 100798998 100784442 11429679 829557 103830833 103844362 100255846 100263065 100241923 107908893 107935017 107894289 106381077 106432291 106391056 102577977 102615487 102628035 101258105 101261596 101264108 102585145 102580924 107809091 107813138 107814429 4345242 4341408 4346409 100383542 100502035 100381531 123053837 123157268 123154688 123411286 123427184 123398305 8075901 110432373 100829057 100827201 100828713 5715532
The preparation time of this page was 0.1 [sec].