Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4325575   alpha-amylase 3, chloroplastic 
 osa-r.6   4325575   alpha-amylase 3, chloroplastic 
 osa-m.8   4325575   alpha-amylase 3, chloroplastic 
 osa-e.1   4325575   alpha-amylase 3, chloroplastic 
 zma-u.5   103651265   alpha-amylase 3, chloroplastic 
 ath-u.5   AMY3   alpha-amylase-like 3 
 gma-u.5   100810333   alpha-amylase 3, chloroplastic 
 gma-u.5   100788193   alpha-amylase 3, chloroplastic 
 sly-u.5   101257661   alpha-amylase 3, chloroplastic 
 vvi-u.5   100267346   alpha-amylase 3, chloroplastic 
 ppo-u.5   18102525   alpha-amylase 3, chloroplastic 
 mtr-u.5   25502785   alpha-amylase 3, chloroplastic 

close


Top 50 coexpressed genes to 4325575 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 4325575 (osa-u.5 coexpression data)

CoexMap"4325575"


osaLOC4325575 | Entrez gene ID : 4325575      
Species osa zma ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG osa00500 [list] [network] Starch and sucrose metabolism (175 genes)
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (757 genes)  IEA  
GO CC
GO MF
GO:0004556 [list] [network] alpha-amylase activity  (10 genes)  IEA  
GO:0005509 [list] [network] calcium ion binding  (338 genes)  IEA  
Protein XP_015649620.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_015649620.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_015649620.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4325575
osa-r.6
for
4325575
osa-m.8
for
4325575
osa-e.1
for
4325575
zma-u.5
for
103651265
ath-u.5
for
AMY3
gma-u.5
for
100810333
gma-u.5
for
100788193
sly-u.5
for
101257661
vvi-u.5
for
100267346
ppo-u.5
for
18102525
mtr-u.5
for
25502785


Ortholog ID: 9873
Species osa tae tae hvu bdi zma sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC4325575 LOC123078800 LOC123070353 LOC123444271 LOC100821502 LOC103651265 LOC8069792 AMY3 LOC100810333 LOC100788193 LOC101257661 LOC103831524 LOC100267346 LOC18102525 LOC25502785 LOC107910680 LOC107887239 LOC106405641 LOC106432554 LOC102599630 LOC102577968 LOC107788587 LOC107780165
Function* alpha-amylase 3, chloroplastic alpha-amylase 3, chloroplastic alpha-amylase 3, chloroplastic alpha-amylase 3, chloroplastic alpha-amylase 3, chloroplastic alpha-amylase 3, chloroplastic alpha-amylase 3, chloroplastic alpha-amylase-like 3 alpha-amylase 3, chloroplastic alpha-amylase 3, chloroplastic alpha-amylase 3, chloroplastic alpha-amylase 3, chloroplastic alpha-amylase 3, chloroplastic alpha-amylase 3, chloroplastic alpha-amylase 3, chloroplastic alpha-amylase 3, chloroplastic alpha-amylase 3, chloroplastic alpha-amylase 3, chloroplastic alpha-amylase 3, chloroplastic alpha-amylase 3, chloroplastic alpha-amylase 3, chloroplastic alpha-amylase 3, chloroplastic alpha-amylase 3, chloroplastic
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 9
tae00010 Glycolysis / Gluconeogenesis 3
tae00030 Pentose phosphate pathway 3
tae00051 Fructose and mannose metabolism 3
tae00052 Galactose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 5
tae00010 Glycolysis / Gluconeogenesis 3
tae00030 Pentose phosphate pathway 3
tae00051 Fructose and mannose metabolism 3
tae00052 Galactose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00260 Glycine, serine and threonine metabolism 3
bdi00261 Monobactam biosynthesis 3
bdi00270 Cysteine and methionine metabolism 3
bdi00300 Lysine biosynthesis 3
bdi01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 3
sbi01200 Carbon metabolism 2
sbi01210 2-Oxocarboxylic acid metabolism 2
sbi03050 Proteasome 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 2
gma03083 Polycomb repressive complex 2
gma03250 Viral life cycle - HIV-1 2
gma03440 Homologous recombination 2
gma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 3
gma01240 Biosynthesis of cofactors 3
gma00500 Starch and sucrose metabolism 3
gma04075 Plant hormone signal transduction 3
gma00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00310 Lysine degradation 2
sly00500 Starch and sucrose metabolism 2
sly00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 3
vvi01240 Biosynthesis of cofactors 2
vvi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 6
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 5
mtr00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 4
ghi00591 Linoleic acid metabolism 2
ghi00040 Pentose and glucuronate interconversions 2
ghi00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 4
ghi00591 Linoleic acid metabolism 2
ghi00040 Pentose and glucuronate interconversions 2
ghi00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 8
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna00270 Cysteine and methionine metabolism 2
bna00350 Tyrosine metabolism 2
bna00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 8
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna00270 Cysteine and methionine metabolism 2
bna00350 Tyrosine metabolism 2
bna00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 3
sot00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 4
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 6
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4325575 123078800 123070353 123444271 100821502 103651265 8069792 843319 100810333 100788193 101257661 103831524 100267346 18102525 25502785 107910680 107887239 106405641 106432554 102599630 102577968 107788587 107780165
The preparation time of this page was 0.1 [sec].