ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-u.5	4328669	(6-4)DNA photolyase
osa-r.6	4328669	(6-4)DNA photolyase
osa-e.1	4328669	(6-4)DNA photolyase
zma-u.5	100280217	uncharacterized LOC100280217
ath-u.5	UVR3	DNA photolyase family protein
gma-u.5	100780347	(6-4)DNA photolyase
sly-u.5	101262697	(6-4)DNA photolyase
vvi-u.5	100256713	(6-4)DNA photolyase
ppo-u.5	7475723	(6-4)DNA photolyase
mtr-u.5	25491344	(6-4)DNA photolyase

functional annotation

KEGG

GO BP

GO:0032922 [list] [network] circadian regulation of gene expression	(4 genes)	IEA
GO:0043153 [list] [network] entrainment of circadian clock by photoperiod	(4 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus	(3003 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(5212 genes)	IEA

GO MF

GO:0003904 [list] [network] deoxyribodipyrimidine photo-lyase activity	(7 genes)	IEA
GO:0071949 [list] [network] FAD binding	(75 genes)	IEA
GO:0003677 [list] [network] DNA binding	(1843 genes)	IEA

Protein

NP_001396326.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, nucl 1, mito 1, plas 1, nucl_plas 1, mito_plas 1

(predict for NP_001396326.1)

Subcellular
localization
TargetP

other 5

(predict for NP_001396326.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4328669	osa-r.6 for 4328669	osa-e.1 for 4328669	zma-u.5 for 100280217	ath-u.5 for UVR3	gma-u.5 for 100780347	sly-u.5 for 101262697	vvi-u.5 for 100256713	ppo-u.5 for 7475723	mtr-u.5 for 25491344

Ortholog ID: 11303

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

UVR3

Function^*

(6-4)DNA photolyase

uncharacterized LOC100280217

(6-4)DNA photolyase

DNA photolyase family protein

(6-4)DNA photolyase

(6-4)DNA photolyase-like

(6-4)DNA photolyase

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00196	Photosynthesis - antenna proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00941	Flavonoid biosynthesis	4
bdi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03420	Nucleotide excision repair	2
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03018	RNA degradation	2
ppo04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00760	Nicotinate and nicotinamide metabolism	4
ghi03420	Nucleotide excision repair	2
ghi04120	Ubiquitin mediated proteolysis	2
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00760	Nicotinate and nicotinamide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04712	Circadian rhythm - plant	4
bna03420	Nucleotide excision repair	2
bna04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04712	Circadian rhythm - plant	4
bna03420	Nucleotide excision repair	2
bna04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	3
sot00941	Flavonoid biosynthesis	2
sot04712	Circadian rhythm - plant	2

Expression

Expression pattern

Entrez Gene ID^*

4328669

123144349

123402574

100823069

100280217

8082933

820804

100780347

101262697

103840624

100256713

7475723

25491344

107901744

107962174

106349575

106387503

102605735

102617013

107773193

107790260

5723611

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 4328669 (osa-u.5 coexpression data)

Top 50 enrichment test to 4328669 (osa-u.5 coexpression data)


Species	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	3	1	1	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4328669 (osa-u.5 coexpression data)

Top 50 enrichment test to 4328669 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**