ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-u.5	4338792	probable mediator of RNA polymerase II transcription subunit 26b
osa-r.6	4338792	probable mediator of RNA polymerase II transcription subunit 26b
osa-m.8	4338792	probable mediator of RNA polymerase II transcription subunit 26b
osa-e.1	4338792	probable mediator of RNA polymerase II transcription subunit 26b
osa-u.5	4344077	probable mediator of RNA polymerase II transcription subunit 26b
zma-u.5	100501416	uncharacterized LOC100501416
zma-u.5	100384760	uncharacterized LOC100384760
zma-u.5	100382505	uncharacterized LOC100382505
ath-u.5	AT3G10820	Transcription elongation factor (TFIIS) family protein
ath-u.5	AT5G05140	Transcription elongation factor (TFIIS) family protein
gma-u.5	100817835	probable mediator of RNA polymerase II transcription subunit 26b
gma-u.5	100799367	probable mediator of RNA polymerase II transcription subunit 26b
gma-u.5	100775579	probable mediator of RNA polymerase II transcription subunit 26b
sly-u.5	101243966	probable mediator of RNA polymerase II transcription subunit 26b
sly-u.5	101248344	probable mediator of RNA polymerase II transcription subunit 26b
vvi-u.5	100250012	probable mediator of RNA polymerase II transcription subunit 26b
ppo-u.5	7458912	probable mediator of RNA polymerase II transcription subunit 26b
ppo-u.5	7495686	probable mediator of RNA polymerase II transcription subunit 26b
mtr-u.5	11413295	probable mediator of RNA polymerase II transcription subunit 26b

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(3003 genes)

IEA

GO MF

Protein

XP_015640281.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, chlo 2

(predict for XP_015640281.1)

Subcellular
localization
TargetP

other 5

(predict for XP_015640281.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4338792	osa-r.6 for 4338792	osa-m.8 for 4338792	osa-e.1 for 4338792	osa-u.5 for 4344077	zma-u.5 for 100501416	zma-u.5 for 100384760	zma-u.5 for 100382505	ath-u.5 for AT3G10820	ath-u.5 for AT5G05140	gma-u.5 for 100817835	gma-u.5 for 100799367	gma-u.5 for 100775579	sly-u.5 for 101243966	sly-u.5 for 101248344	vvi-u.5 for 100250012	ppo-u.5 for 7458912	ppo-u.5 for 7495686	mtr-u.5 for 11413295

Ortholog

Ortholog ID: 1972

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

probable mediator of RNA polymerase II transcription subunit 26b

putative mediator of RNA polymerase II transcription subunit 26b

uncharacterized LOC100382505

probable mediator of RNA polymerase II transcription subunit 26b

Transcription elongation factor (TFIIS) family protein

probable mediator of RNA polymerase II transcription subunit 26b

putative mediator of RNA polymerase II transcription subunit 26b

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00561	Glycerolipid metabolism	2
sbi00564	Glycerophospholipid metabolism	2
sbi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00053	Ascorbate and aldarate metabolism	2
ath00562	Inositol phosphate metabolism	2
ath01250	Biosynthesis of nucleotide sugars	2
ath00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	2
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00564	Glycerophospholipid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00564	Glycerophospholipid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2
nta04130	SNARE interactions in vesicular transport	2

Expression

Expression pattern

Entrez Gene ID^*

4344077

4338792

123132933

123187763

123442966

123425058

100842292

100278816

100382505

110430301

8073096

820251

830396

100799367

100775579

101243966

103850571

100250012

7495686

7458912

11413295

107925887

121209483

106422606

102586751

102608342

107792143

107832137

66051920

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 4338792 (osa-u.5 coexpression data)

Top 50 enrichment test to 4338792 (osa-u.5 coexpression data)


Species	osa	zma	ath	gma	sly	vvi	ppo	mtr	hvu	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	5	3	2	3	2	1	2	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4338792 (osa-u.5 coexpression data)

Top 50 enrichment test to 4338792 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**