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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   9270000   cysteine--tRNA ligase CPS1, chloroplastic/mitochondrial 
 osa-u.5   4347821   cysteine--tRNA ligase CPS1 homolog, chloroplastic/mitochondrial-like 
 tae-r.2   123098747   cysteine--tRNA ligase CPS1, chloroplastic/mitochondrial 
 tae-r.2   123104780   cysteine--tRNA ligase CPS1 homolog, chloroplastic/mitochondrial 
 tae-r.2   123113064   cysteine--tRNA ligase CPS1 homolog, chloroplastic/mitochondrial 
 hvu-r.1   123449680   cysteine--tRNA ligase CPS1, chloroplastic/mitochondrial-like 
 hvu-r.1   123451939   cysteine--tRNA ligase CPS1 homolog, chloroplastic/mitochondrial 
 bdi-r.1   100834139   cysteine--tRNA ligase CPS1, chloroplastic/mitochondrial 
 bdi-r.1   100837019   cysteine--tRNA ligase CPS1 homolog, chloroplastic/mitochondrial 
 zma-u.5   100193566   Cysteine--tRNA ligase 1 cytoplasmic 
 zma-u.5   100192902   Cysteine--tRNA ligase chloroplastic/mitochondrial 
 zma-u.5   103644288   cysteine--tRNA ligase CPS1, chloroplastic/mitochondrial-like 
 sbi-r.1   110430328   cysteine--tRNA ligase, chloroplastic/mitochondrial-like 
 sbi-r.1   8077246   cysteine--tRNA ligase, chloroplastic/mitochondrial 
 sbi-r.1   8085498   cysteine--tRNA ligase 2, cytoplasmic 
 ath-u.5   SYCO ARATH   Cysteinyl-tRNA synthetase, class Ia family protein 
 ath-u.5   AT3G56300   Cysteinyl-tRNA synthetase, class Ia family protein 
 ath-u.5   AT5G38830   Cysteinyl-tRNA synthetase, class Ia family protein 
 gma-u.5   100777447   cysteine--tRNA ligase 2, cytoplasmic 
 gma-u.5   100786700   cysteine--tRNA ligase, chloroplastic/mitochondrial 
 gma-u.5   100812332   cysteine--tRNA ligase 2, cytoplasmic 
 sly-u.5   101251377   cysteine--tRNA ligase 2, cytoplasmic 
 sly-u.5   101256769   cysteine--tRNA ligase, chloroplastic/mitochondrial 
 bra-r.6   103856987   cysteine--tRNA ligase 2, cytoplasmic-like 
 bra-r.6   103863802   cysteine--tRNA ligase 2, cytoplasmic 
 bra-r.6   103867896   cysteine--tRNA ligase, chloroplastic/mitochondrial 
 vvi-u.5   100251639   cysteine--tRNA ligase 2, cytoplasmic 
 vvi-u.5   100854736   cysteine--tRNA ligase 2, cytoplasmic 
 vvi-u.5   100245851   cysteine--tRNA ligase, chloroplastic/mitochondrial 
 ppo-u.5   7458385   cysteine--tRNA ligase, chloroplastic/mitochondrial 
 ppo-u.5   7475579   cysteine--tRNA ligase 2, cytoplasmic 
 mtr-u.5   11432999   cysteine--tRNA ligase, chloroplastic/mitochondrial 
 mtr-u.5   11431016   cysteine--tRNA ligase 2, cytoplasmic 
 ghi-r.1   107948405   cysteine--tRNA ligase 2, cytoplasmic 
 ghi-r.1   107894094   cysteine--tRNA ligase 2, cytoplasmic 
 ghi-r.1   107894671   cysteine--tRNA ligase 2, cytoplasmic 
 bna-r.1   125585352   cysteine--tRNA ligase, chloroplastic/mitochondrial 
 bna-r.1   106410917   cysteine--tRNA ligase 2, cytoplasmic 
 bna-r.1   106451381   cysteine--tRNA ligase, chloroplastic/mitochondrial 
 sot-r.1   102581041   cysteine--tRNA ligase 2, cytoplasmic 
 sot-r.1   102604325   cysteine--tRNA ligase, chloroplastic/mitochondrial 
 cit-r.1   102608826   cysteine--tRNA ligase, chloroplastic/mitochondrial 
 cit-r.1   102624731   cysteine--tRNA ligase 2, cytoplasmic 
 nta-r.1   107796507   cysteine--tRNA ligase, chloroplastic/mitochondrial 
 nta-r.1   107766982   cysteine--tRNA ligase, chloroplastic/mitochondrial-like 
 nta-r.1   107767551   cysteine--tRNA ligase, chloroplastic/mitochondrial-like 
 cre-r.1   CHLRE_01g069472v5   uncharacterized protein 

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Top 50 coexpressed genes to 9270000 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 9270000 (osa-u.5 coexpression data)

CoexMap"4348825"


osaLOC4348825 | Entrez gene ID : 4348825    
Species osa tae hvu bdi zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 3 2 2 3 3 3 3 2 3 3 2 2 3 3 2 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG osa00970 [list] [network] Aminoacyl-tRNA biosynthesis (115 genes)
GO BP
GO:0006423 [list] [network] cysteinyl-tRNA aminoacylation  (4 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (5212 genes)  IEA  
GO MF
GO:0004817 [list] [network] cysteine-tRNA ligase activity  (4 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2335 genes)  IEA  
Protein XP_015613843.3 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  cyto_E.R. 4,  nucl 1  (predict for XP_015613843.3)
Subcellular
localization
TargetP
other 9  (predict for XP_015613843.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
9270000
osa-u.5
for
4347821
tae-r.2
for
123098747
tae-r.2
for
123104780
tae-r.2
for
123113064
hvu-r.1
for
123449680
hvu-r.1
for
123451939
bdi-r.1
for
100834139
bdi-r.1
for
100837019
zma-u.5
for
100193566
zma-u.5
for
100192902
zma-u.5
for
103644288
sbi-r.1
for
110430328
sbi-r.1
for
8077246
sbi-r.1
for
8085498
ath-u.5
for
SYCO ARATH
ath-u.5
for
AT3G56300
ath-u.5
for
AT5G38830
gma-u.5
for
100777447
gma-u.5
for
100786700
gma-u.5
for
100812332
sly-u.5
for
101251377
sly-u.5
for
101256769
bra-r.6
for
103856987
bra-r.6
for
103863802
bra-r.6
for
103867896
vvi-u.5
for
100251639
vvi-u.5
for
100854736
vvi-u.5
for
100245851
ppo-u.5
for
7458385
ppo-u.5
for
7475579
mtr-u.5
for
11432999
mtr-u.5
for
11431016
ghi-r.1
for
107948405
ghi-r.1
for
107894094
ghi-r.1
for
107894671
bna-r.1
for
125585352
bna-r.1
for
106410917
bna-r.1
for
106451381
sot-r.1
for
102581041
sot-r.1
for
102604325
cit-r.1
for
102608826
cit-r.1
for
102624731
nta-r.1
for
107796507
nta-r.1
for
107766982
nta-r.1
for
107767551
cre-r.1
for
CHLRE_01g069472v5


Ortholog ID: 1960
Species osa osa tae tae tae hvu hvu bdi bdi zma zma zma sbi sbi sbi ath ath ath gma gma gma sly sly bra bra bra vvi vvi vvi ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot cit cit nta nta nta cre
Symbol LOC9270000 LOC4347821 LOC123098747 LOC123104780 LOC123113064 LOC123449680 LOC123451939 LOC100834139 LOC100837019 LOC100193566 LOC100192902 LOC103644288 LOC110430328 LOC8077246 LOC8085498 SYCO ARATH AT3G56300 AT5G38830 LOC100777447 LOC100786700 LOC100812332 LOC101251377 LOC101256769 LOC103856987 LOC103867896 LOC103850130 LOC100251639 LOC100854736 LOC100245851 LOC7458385 LOC7475579 LOC11432999 LOC11431016 LOC107894094 LOC107947024 LOC107947014 LOC111211565 LOC106445932 LOC106352661 LOC102581041 LOC102604325 LOC102608826 LOC102624731 LOC107796507 LOC107766982 LOC107818984 CHLRE_01g069472v5
Function* cysteine--tRNA ligase CPS1, chloroplastic/mitochondrial cysteine--tRNA ligase CPS1 homolog, chloroplastic/mitochondrial-like cysteine--tRNA ligase CPS1, chloroplastic/mitochondrial cysteine--tRNA ligase CPS1 homolog, chloroplastic/mitochondrial cysteine--tRNA ligase CPS1 homolog, chloroplastic/mitochondrial cysteine--tRNA ligase CPS1, chloroplastic/mitochondrial-like cysteine--tRNA ligase CPS1 homolog, chloroplastic/mitochondrial cysteine--tRNA ligase CPS1, chloroplastic/mitochondrial cysteine--tRNA ligase CPS1 homolog, chloroplastic/mitochondrial Cysteine--tRNA ligase 1 cytoplasmic Cysteine--tRNA ligase chloroplastic/mitochondrial cysteine--tRNA ligase CPS1, chloroplastic/mitochondrial-like cysteine--tRNA ligase, chloroplastic/mitochondrial-like cysteine--tRNA ligase, chloroplastic/mitochondrial cysteine--tRNA ligase 2, cytoplasmic Cysteinyl-tRNA synthetase, class Ia family protein Cysteinyl-tRNA synthetase, class Ia family protein Cysteinyl-tRNA synthetase, class Ia family protein cysteine--tRNA ligase 2, cytoplasmic cysteine--tRNA ligase, chloroplastic/mitochondrial cysteine--tRNA ligase 2, cytoplasmic cysteine--tRNA ligase 2, cytoplasmic cysteine--tRNA ligase, chloroplastic/mitochondrial cysteine--tRNA ligase 2, cytoplasmic-like cysteine--tRNA ligase, chloroplastic/mitochondrial cysteine--tRNA ligase 2, cytoplasmic cysteine--tRNA ligase 2, cytoplasmic cysteine--tRNA ligase 2, cytoplasmic cysteine--tRNA ligase, chloroplastic/mitochondrial cysteine--tRNA ligase, chloroplastic/mitochondrial cysteine--tRNA ligase 2, cytoplasmic cysteine--tRNA ligase, chloroplastic/mitochondrial cysteine--tRNA ligase 2, cytoplasmic cysteine--tRNA ligase 2, cytoplasmic cysteine--tRNA ligase 2, cytoplasmic cysteine--tRNA ligase 2, cytoplasmic cysteine--tRNA ligase 2, cytoplasmic-like cysteine--tRNA ligase 2, cytoplasmic-like cysteine--tRNA ligase 2, cytoplasmic cysteine--tRNA ligase 2, cytoplasmic cysteine--tRNA ligase, chloroplastic/mitochondrial cysteine--tRNA ligase, chloroplastic/mitochondrial cysteine--tRNA ligase 2, cytoplasmic cysteine--tRNA ligase, chloroplastic/mitochondrial cysteine--tRNA ligase, chloroplastic/mitochondrial-like cysteine--tRNA ligase, chloroplastic/mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 7
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae00970 Aminoacyl-tRNA biosynthesis 3
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 9
tae03040 Spliceosome 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 7
tae03040 Spliceosome 2
tae04141 Protein processing in endoplasmic reticulum 2
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
hvu00970 Aminoacyl-tRNA biosynthesis 3
hvu00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 4
bdi00970 Aminoacyl-tRNA biosynthesis 3
bdi00020 Citrate cycle (TCA cycle) 3
bdi01210 2-Oxocarboxylic acid metabolism 2
bdi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 4
bdi00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 5
sbi01200 Carbon metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
sly03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 3
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
bra00520 Amino sugar and nucleotide sugar metabolism 2
bra01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 5
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 5
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 7
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
sot00970 Aminoacyl-tRNA biosynthesis 2
sot04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00780 Biotin metabolism 3
nta01240 Biosynthesis of cofactors 3
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00780 Biotin metabolism 4
nta01240 Biosynthesis of cofactors 4
nta03040 Spliceosome 3
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 5
cre01240 Biosynthesis of cofactors 4
cre03060 Protein export 2
cre00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 9270000 4347821 123098747 123104780 123113064 123449680 123451939 100834139 100837019 100193566 100192902 103644288 110430328 8077246 8085498 817673 824797 833874 100777447 100786700 100812332 101251377 101256769 103856987 103867896 103850130 100251639 100854736 100245851 7458385 7475579 11432999 11431016 107894094 107947024 107947014 111211565 106445932 106352661 102581041 102604325 102608826 102624731 107796507 107766982 107818984 5725796
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