ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cre-r.1	CHLRE_17g711200v5	uncharacterized protein
ath-u.5	AT2G38740	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
gma-u.5	100802762	phosphatase YqaB-like
gma-u.5	100805421	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
gma-u.5	100793483	phosphatase YqaB-like
sly-u.5	101258396	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
sly-u.5	101245863	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
osa-u.5	112935984	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
osa-u.5	4349443	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
zma-u.5	100282116	uncharacterized LOC100282116
zma-u.5	100501636	uncharacterized LOC100501636
bra-r.6	103857810	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
bra-r.6	103865684	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
vvi-u.5	100252262	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
vvi-u.5	100247838	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
ppo-u.5	18094216	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
ppo-u.5	18096924	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
mtr-u.5	11439431	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
tae-r.2	123051953	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
tae-r.2	123088445	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
tae-r.2	123127990	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
hvu-r.1	123411568	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
hvu-r.1	123426748	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
ghi-r.1	107946716	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
ghi-r.1	107886386	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
ghi-r.1	107943055	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
bna-r.1	106447684	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
bna-r.1	125606846	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
bna-r.1	106402737	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
sbi-r.1	8066886	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
sbi-r.1	8055620	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
sot-r.1	102596724	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
sot-r.1	102599074	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
sot-r.1	102578921	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
cit-r.1	102618265	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
bdi-r.1	100831053	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
bdi-r.1	100838401	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
bdi-r.1	100841874	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
nta-r.1	107781930	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
nta-r.1	107823693	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
nta-r.1	107785350	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp

Top 50 coexpressed genes to CHLRE_17g711200v5 (cre-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to CHLRE_17g711200v5 (cre-r.1 coexpression data)

CoexMap"5717124"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_001691668.2 [sequence] [blastp]

Subcellular
localization
wolf

mito 6, chlo_mito 5, chlo 3

(predict for XP_001691668.2)

Subcellular
localization
TargetP

mito 6, chlo 4

(predict for XP_001691668.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_17g711200v5	ath-u.5 for AT2G38740	gma-u.5 for 100802762	gma-u.5 for 100805421	gma-u.5 for 100793483	sly-u.5 for 101258396	sly-u.5 for 101245863	osa-u.5 for 112935984	osa-u.5 for 4349443	zma-u.5 for 100282116	zma-u.5 for 100501636	bra-r.6 for 103857810	bra-r.6 for 103865684	vvi-u.5 for 100252262	vvi-u.5 for 100247838	ppo-u.5 for 18094216	ppo-u.5 for 18096924	mtr-u.5 for 11439431	tae-r.2 for 123051953	tae-r.2 for 123088445	tae-r.2 for 123127990	hvu-r.1 for 123411568	hvu-r.1 for 123426748	ghi-r.1 for 107946716	ghi-r.1 for 107886386	ghi-r.1 for 107943055	bna-r.1 for 106447684	bna-r.1 for 125606846	bna-r.1 for 106402737	sbi-r.1 for 8066886	sbi-r.1 for 8055620	sot-r.1 for 102596724	sot-r.1 for 102599074	sot-r.1 for 102578921	cit-r.1 for 102618265	bdi-r.1 for 100831053	bdi-r.1 for 100838401	bdi-r.1 for 100841874	nta-r.1 for 107781930	nta-r.1 for 107823693	nta-r.1 for 107785350

Ortholog

Ortholog ID: 3091

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

Function^*

uncharacterized protein

Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

phosphatase YqaB-like

haloacid dehalogenase-like hydrolase domain-containing protein Sgpp

phosphatase YqaB-like

haloacid dehalogenase-like hydrolase domain-containing protein Sgpp

uncharacterized LOC100282116

uncharacterized LOC100501636

haloacid dehalogenase-like hydrolase domain-containing protein Sgpp

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00740	Riboflavin metabolism	2
ath04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01240	Biosynthesis of cofactors	4
gma00010	Glycolysis / Gluconeogenesis	3
gma01200	Carbon metabolism	3
gma01230	Biosynthesis of amino acids	3
gma00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	2
gma00053	Ascorbate and aldarate metabolism	2
gma00071	Fatty acid degradation	2
gma00280	Valine, leucine and isoleucine degradation	2
gma00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01240	Biosynthesis of cofactors	5
gma00564	Glycerophospholipid metabolism	3
gma00740	Riboflavin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01240	Biosynthesis of cofactors	5
sly00020	Citrate cycle (TCA cycle)	3
sly00620	Pyruvate metabolism	3
sly01200	Carbon metabolism	3
sly00053	Ascorbate and aldarate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01200	Carbon metabolism	9
osa00010	Glycolysis / Gluconeogenesis	8
osa00620	Pyruvate metabolism	6
osa01230	Biosynthesis of amino acids	5
osa00052	Galactose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00920	Sulfur metabolism	2
osa01320	Sulfur cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03083	Polycomb repressive complex	2
zma04120	Ubiquitin mediated proteolysis	2
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03050	Proteasome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00010	Glycolysis / Gluconeogenesis	4
ppo01200	Carbon metabolism	4
ppo01230	Biosynthesis of amino acids	4
ppo00564	Glycerophospholipid metabolism	2
ppo00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	6
mtr01240	Biosynthesis of cofactors	2
mtr03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01200	Carbon metabolism	6
tae00260	Glycine, serine and threonine metabolism	5
tae01230	Biosynthesis of amino acids	5
tae00330	Arginine and proline metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03050	Proteasome	6
tae00061	Fatty acid biosynthesis	3
tae00071	Fatty acid degradation	3
tae01212	Fatty acid metabolism	3
tae04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00230	Purine metabolism	2
sbi01200	Carbon metabolism	2
sbi00520	Amino sugar and nucleotide sugar metabolism	2
sbi01250	Biosynthesis of nucleotide sugars	2
sbi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01240	Biosynthesis of cofactors	2
sbi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01240	Biosynthesis of cofactors	4
sot00750	Vitamin B6 metabolism	2
sot00053	Ascorbate and aldarate metabolism	2
sot00562	Inositol phosphate metabolism	2
sot04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01240	Biosynthesis of cofactors	4
sot00010	Glycolysis / Gluconeogenesis	3
sot00053	Ascorbate and aldarate metabolism	3
sot00620	Pyruvate metabolism	3
sot00020	Citrate cycle (TCA cycle)	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	2
cit01230	Biosynthesis of amino acids	2
cit04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04130	SNARE interactions in vesicular transport	2
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	4
nta01200	Carbon metabolism	3
nta00020	Citrate cycle (TCA cycle)	2
nta00310	Lysine degradation	2
nta00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00010	Glycolysis / Gluconeogenesis	5
nta01200	Carbon metabolism	5
nta01230	Biosynthesis of amino acids	4
nta03018	RNA degradation	4
nta04820	Cytoskeleton in muscle cells	4

Expression

Expression pattern

Entrez Gene ID^*

5717124

818456

100802762

100805421

100793483

101258396

101245863

112935984

4349443

100282116

100501636

103857810

103865684

100252262

100247838

18094216

18096924

11439431

123088445

123167532

123181634

123411568

123426748

107946716

107886386

107943055

106447684

106402737

106410648

8066886

8055620

102596724

102599074

102578921

102618265

100831053

100838401

100841874

107781930

107823693

107779921

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Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	1	3	2	2	2	2	2	2	1	3	2	3	3	2	3	1	3	3

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_17g711200v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_17g711200v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**