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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_26g756797v5   uncharacterized protein 
 ath-u.5   PBF1   N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein 
 gma-u.5   100810291   proteasome subunit beta type-1-like 
 gma-u.5   100306148   putative proteasome subunit beta type-1 
 sly-u.5   101266585   proteasome subunit beta type-1 
 osa-u.5   4346117   proteasome subunit beta type-1-like 
 osa-u.5   4347507   proteasome subunit beta type-1-like 
 zma-u.5   100280821   uncharacterized LOC100280821 
 zma-u.5   103632974   proteasome subunit beta type-1 
 zma-u.5   100286342   proteasome subunit beta type 1 
 bra-r.6   103830272   proteasome subunit beta type-1 
 bra-r.6   103862858   proteasome subunit beta type-1 
 bra-r.6   103841925   proteasome subunit beta type-1 
 vvi-u.5   100266090   proteasome subunit beta type-1 
 ppo-u.5   7494005   proteasome subunit beta type-1 
 ppo-u.5   7464862   proteasome subunit beta type-1 
 mtr-u.5   11433762   proteasome subunit beta type-1 
 mtr-u.5   11441958   proteasome subunit beta type-1 
 tae-r.2   123122060   proteasome subunit beta type-1 
 tae-r.2   123104305   proteasome subunit beta type-1 
 tae-r.2   123112564   proteasome subunit beta type-1 
 hvu-r.1   123399765   proteasome subunit beta type-1 
 ghi-r.1   107952906   proteasome subunit beta type-1 
 ghi-r.1   107930449   proteasome subunit beta type-1 
 ghi-r.1   107920891   proteasome subunit beta type-1 
 bna-r.1   106452586   proteasome subunit beta type-1 
 bna-r.1   125595021   proteasome subunit beta type-1-like 
 bna-r.1   106445045   proteasome subunit beta type-1 
 sbi-r.1   8060957   proteasome subunit beta type-1 
 sbi-r.1   8054784   proteasome subunit beta type-1 
 sot-r.1   102591288   proteasome subunit beta type-1 
 sot-r.1   102595078   proteasome subunit beta type-1-like 
 cit-r.1   102626953   proteasome subunit beta type-1 
 cit-r.1   102621086   proteasome subunit beta type-1 
 bdi-r.1   100841686   proteasome subunit beta type-1 
 bdi-r.1   100841355   proteasome subunit beta type-1 
 nta-r.1   107764037   proteasome subunit beta type-1 
 nta-r.1   107771299   proteasome subunit beta type-1 
 nta-r.1   107810770   proteasome subunit beta type-1 

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Top 50 coexpressed genes to CHLRE_26g756797v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_26g756797v5 (cre-r.1 coexpression data)

CoexMap"5727787"


creCHLRE_26g756797v5 | Entrez gene ID : 5727787      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 2 3 3 1 2 2 3 1 3 3 2 2 2 2 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03050 [list] [network] Proteasome (36 genes)
GO BP
GO:0051603 [list] [network] proteolysis involved in protein catabolic process  (216 genes)  IEA  
GO CC
GO:0005839 [list] [network] proteasome core complex  (16 genes)  IEA  
GO MF
Protein XP_042914096.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  plas 3,  nucl_plas 2,  cyto 2,  chlo_mito 2  (predict for XP_042914096.1)
Subcellular
localization
TargetP
other 8  (predict for XP_042914096.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_26g756797v5
ath-u.5
for
PBF1
gma-u.5
for
100810291
gma-u.5
for
100306148
sly-u.5
for
101266585
osa-u.5
for
4346117
osa-u.5
for
4347507
zma-u.5
for
100280821
zma-u.5
for
103632974
zma-u.5
for
100286342
bra-r.6
for
103830272
bra-r.6
for
103862858
bra-r.6
for
103841925
vvi-u.5
for
100266090
ppo-u.5
for
7494005
ppo-u.5
for
7464862
mtr-u.5
for
11433762
mtr-u.5
for
11441958
tae-r.2
for
123122060
tae-r.2
for
123104305
tae-r.2
for
123112564
hvu-r.1
for
123399765
ghi-r.1
for
107952906
ghi-r.1
for
107930449
ghi-r.1
for
107920891
bna-r.1
for
106452586
bna-r.1
for
125595021
bna-r.1
for
106445045
sbi-r.1
for
8060957
sbi-r.1
for
8054784
sot-r.1
for
102591288
sot-r.1
for
102595078
cit-r.1
for
102626953
cit-r.1
for
102621086
bdi-r.1
for
100841686
bdi-r.1
for
100841355
nta-r.1
for
107764037
nta-r.1
for
107771299
nta-r.1
for
107810770


Ortholog ID: 3821
Species cre ath gma gma sly osa osa zma zma zma bra bra bra vvi ppo ppo mtr mtr tae tae tae hvu ghi ghi ghi bna bna bna sbi sbi sot sot cit cit bdi bdi nta nta nta
Symbol CHLRE_26g756797v5 PBF1 LOC100810291 LOC100306148 LOC101266585 LOC4346117 LOC4347507 LOC100280821 LOC103632974 LOC100286342 LOC103830272 LOC103862858 LOC103841925 LOC100266090 LOC7494005 LOC7464862 LOC11433762 LOC11441958 LOC123122060 LOC123104305 LOC123112564 LOC123399765 LOC107952906 LOC107930449 LOC107954580 LOC106452586 LOC106415919 LOC106415873 LOC8060957 LOC8054784 LOC102591288 LOC102595078 LOC102626953 LOC102621086 LOC100841686 LOC100841355 LOC107764037 LOC107774588 LOC107798889
Function* uncharacterized protein N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein proteasome subunit beta type-1-like putative proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1-like proteasome subunit beta type-1-like uncharacterized LOC100280821 proteasome subunit beta type-1 proteasome subunit beta type 1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1-like proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 14
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 5
osa00010 Glycolysis / Gluconeogenesis 3
osa01200 Carbon metabolism 3
osa01230 Biosynthesis of amino acids 3
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00010 Glycolysis / Gluconeogenesis 3
zma00710 Carbon fixation by Calvin cycle 3
zma01200 Carbon metabolism 3
zma01230 Biosynthesis of amino acids 3
zma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 10
zma03420 Nucleotide excision repair 3
zma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 4
zma03015 mRNA surveillance pathway 2
zma03420 Nucleotide excision repair 2
zma04120 Ubiquitin mediated proteolysis 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 9
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 14
bra03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 6
vvi03010 Ribosome 4
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 10
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 11
tae03040 Spliceosome 4
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 6
ghi03020 RNA polymerase 3
ghi03420 Nucleotide excision repair 3
ghi04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 6
ghi03020 RNA polymerase 3
ghi03420 Nucleotide excision repair 3
ghi04122 Sulfur relay system 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 6
ghi03020 RNA polymerase 3
ghi03420 Nucleotide excision repair 3
ghi04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 8
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 8
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 6
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 10
sbi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 14
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 13
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 11
nta04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 12
nta00260 Glycine, serine and threonine metabolism 2
nta00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 11
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5727787 825253 100810291 100306148 101266585 4346117 4347507 100280821 103632974 100286342 103830272 103862858 103841925 100266090 7494005 7464862 11433762 11441958 123122060 123104305 123112564 123399765 107952906 107930449 107954580 106452586 106415919 106415873 8060957 8054784 102591288 102595078 102626953 102621086 100841686 100841355 107764037 107774588 107798889
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