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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8060957   proteasome subunit beta type-1 
 zma-u.5   100280821   uncharacterized LOC100280821 
 zma-u.5   103632974   proteasome subunit beta type-1 
 zma-u.5   100286342   proteasome subunit beta type 1 
 osa-u.5   4346117   proteasome subunit beta type-1-like 
 osa-u.5   4347507   proteasome subunit beta type-1-like 
 ath-u.5   PBF1   N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein 
 gma-u.5   100810291   proteasome subunit beta type-1-like 
 gma-u.5   100306148   putative proteasome subunit beta type-1 
 sly-u.5   101266585   proteasome subunit beta type-1 
 vvi-u.5   100266090   proteasome subunit beta type-1 
 ppo-u.5   7464862   proteasome subunit beta type-1 
 ppo-u.5   7494005   proteasome subunit beta type-1 
 mtr-u.5   11433762   proteasome subunit beta type-1 
 mtr-u.5   11441958   proteasome subunit beta type-1 

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Top 50 coexpressed genes to 8060957 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8060957 (sbi-r.1 coexpression data)

CoexMap"8060957"


sbiLOC8060957 | Entrez gene ID : 8060957      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 2 1 2 1 1 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03050 [list] [network] Proteasome (59 genes)
GO BP
GO:0051603 [list] [network] proteolysis involved in protein catabolic process  (358 genes)  IEA  
GO CC
GO:0005839 [list] [network] proteasome core complex  (23 genes)  IEA  
GO MF
Protein XP_002445824.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  cyto 3,  chlo_mito 3  (predict for XP_002445824.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002445824.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8060957

.
zma-u.5
for
100280821

.
zma-u.5
for
103632974

.
zma-u.5
for
100286342

.
osa-u.5
for
4346117

.
osa-u.5
for
4347507

.
ath-u.5
for
PBF1

.
gma-u.5
for
100810291

.
gma-u.5
for
100306148

.
sly-u.5
for
101266585

.
vvi-u.5
for
100266090

.
ppo-u.5
for
7464862

.
ppo-u.5
for
7494005

.
mtr-u.5
for
11433762

.
mtr-u.5
for
11441958

.


Ortholog ID: 3821
Species ath gma gma sly osa osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol PBF1 LOC100810291 LOC100306148 LOC101266585 LOC4346117 LOC4347507 LOC103632974 LOC100286342 LOC103830272 LOC103862858 LOC100266090 LOC7494005 LOC7464862 LOC11433762 LOC11441958 LOC123104305 LOC123112564 LOC123399765 LOC107952906 LOC107930449 LOC106415873 LOC106415919 CHLRE_26g756797v5 LOC8054784 LOC8060957 LOC102595078 LOC102591288 LOC102626953 LOC102621086 LOC100841355 LOC100841686 LOC107764037 LOC107798889
Function* N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein proteasome subunit beta type-1-like putative proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1-like proteasome subunit beta type-1-like proteasome subunit beta type-1 proteasome subunit beta type 1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 uncharacterized protein proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1-like proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1 proteasome subunit beta type-1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 14
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 5
osa00010 Glycolysis / Gluconeogenesis 3
osa01200 Carbon metabolism 3
osa01230 Biosynthesis of amino acids 3
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 10
zma03420 Nucleotide excision repair 3
zma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 4
zma03015 mRNA surveillance pathway 2
zma03420 Nucleotide excision repair 2
zma04120 Ubiquitin mediated proteolysis 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 9
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 6
vvi03010 Ribosome 4
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 10
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 11
tae03040 Spliceosome 4
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 6
ghi03020 RNA polymerase 3
ghi03420 Nucleotide excision repair 3
ghi04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 6
ghi03020 RNA polymerase 3
ghi03420 Nucleotide excision repair 3
ghi04122 Sulfur relay system 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 8
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 10
sbi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 6
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 14
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 13
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 11
nta04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 11
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825253 100810291 100306148 101266585 4346117 4347507 103632974 100286342 103830272 103862858 100266090 7494005 7464862 11433762 11441958 123104305 123112564 123399765 107952906 107930449 106415873 106415919 5727787 8054784 8060957 102595078 102591288 102626953 102621086 100841355 100841686 107764037 107798889
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