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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   PGLCAT8   glycosyltransferase 
 gma-r.7   PGLCAT8   glycosyltransferase 
 gma-m.5   PGLCAT8   glycosyltransferase 
 gma-u.5   100788223   beta-1,4-xylosyltransferase IRX14 
 gma-u.5   100777505   beta-1,4-xylosyltransferase IRX14 
 gma-u.5   100804618   beta-1,4-xylosyltransferase IRX14 
 mtr-u.5   25493486   probable beta-1,4-xylosyltransferase IRX14H 
 mtr-u.5   11408559   probable beta-1,4-xylosyltransferase IRX14H 
 ppo-u.5   7462594   beta-1,4-xylosyltransferase IRX14 
 ppo-u.5   7476399   probable beta-1,4-xylosyltransferase IRX14H 
 ath-u.5   IRX14   Nucleotide-diphospho-sugar transferases superfamily protein 
 ath-u.5   IRX14-L   Nucleotide-diphospho-sugar transferases superfamily protein 
 vvi-u.5   100266466   probable beta-1,4-xylosyltransferase IRX14H 
 sly-u.5   pglcat8   glycosyltransferase 
 osa-u.5   IRX14   probable glucuronosyltransferase Os06g0687900 
 zma-u.5   103629620   probable beta-1,4-xylosyltransferase IRX14 
 zma-u.5   606446   glycosyltransferase 

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Top 50 coexpressed genes to PGLCAT8 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PGLCAT8 (gma-u.5 coexpression data)

CoexMap"732550"


gmaPGLCAT8 | Entrez gene ID : 732550      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 6 2 2 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010417 [list] [network] glucuronoxylan biosynthetic process  (19 genes)  IEA  
GO:0009834 [list] [network] plant-type secondary cell wall biogenesis  (81 genes)  IEA  
GO CC
GO:0000139 [list] [network] Golgi membrane  (145 genes)  IEA  
GO MF
GO:0015018 [list] [network] galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity  (12 genes)  IEA  
GO:0042285 [list] [network] xylosyltransferase activity  (16 genes)  IEA  
Protein NP_001236823.2 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 3,  nucl 1,  extr 1,  pero 1,  cyto_nucl 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001236823.2)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for NP_001236823.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
PGLCAT8

.
gma-r.7
for
PGLCAT8

.
gma-m.5
for
PGLCAT8

.
gma-u.5
for
100788223

.
gma-u.5
for
100777505

.
gma-u.5
for
100804618

.
mtr-u.5
for
25493486

.
mtr-u.5
for
11408559

.
ppo-u.5
for
7462594

.
ppo-u.5
for
7476399

.
ath-u.5
for
IRX14

.
ath-u.5
for
IRX14-L

.
vvi-u.5
for
100266466

.
sly-u.5
for
pglcat8

.
osa-u.5
for
IRX14

.
zma-u.5
for
103629620

.
zma-u.5
for
606446

.


Ortholog ID: 6637
Species ath ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol IRX14 IRX14-L LOC100804618 LOC100777505 pglcat8 IRX14 LOC103629620 LOC606446 LOC103829526 LOC103861947 LOC100266466 LOC7476399 LOC7462594 LOC11408559 LOC25493486 LOC123156518 LOC123170097 LOC123407014 LOC107931672 LOC107932565 LOC106366787 LOC106439348 LOC8063780 LOC102581104 LOC102627060 LOC100828169 LOC107796855 LOC107769571
Function* Nucleotide-diphospho-sugar transferases superfamily protein Nucleotide-diphospho-sugar transferases superfamily protein beta-1,4-xylosyltransferase IRX14 beta-1,4-xylosyltransferase IRX14 glycosyltransferase probable glucuronosyltransferase Os06g0687900 probable beta-1,4-xylosyltransferase IRX14 glycosyltransferase probable beta-1,4-xylosyltransferase IRX14H probable beta-1,4-xylosyltransferase IRX14 probable beta-1,4-xylosyltransferase IRX14H probable beta-1,4-xylosyltransferase IRX14H beta-1,4-xylosyltransferase IRX14 probable beta-1,4-xylosyltransferase IRX14H probable beta-1,4-xylosyltransferase IRX14H probable beta-1,4-xylosyltransferase IRX14 probable beta-1,4-xylosyltransferase IRX14 probable beta-1,4-xylosyltransferase IRX14 beta-1,4-xylosyltransferase IRX14 beta-1,4-xylosyltransferase IRX14 probable beta-1,4-xylosyltransferase IRX14H beta-1,4-xylosyltransferase IRX14 probable glucuronosyltransferase Os06g0687900 probable beta-1,4-xylosyltransferase IRX14 probable beta-1,4-xylosyltransferase IRX14H probable glucuronosyltransferase Os06g0687900 beta-1,4-xylosyltransferase IRX14 beta-1,4-xylosyltransferase IRX14
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03060 Protein export 2
ath04141 Protein processing in endoplasmic reticulum 2
ath00510 N-Glycan biosynthesis 2
ath00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 4
zma00270 Cysteine and methionine metabolism 3
zma00670 One carbon pool by folate 3
zma01240 Biosynthesis of cofactors 3
zma00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00541 Biosynthesis of various nucleotide sugars 4
bra01250 Biosynthesis of nucleotide sugars 4
bra01240 Biosynthesis of cofactors 4
bra00040 Pentose and glucuronate interconversions 3
bra00053 Ascorbate and aldarate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00670 One carbon pool by folate 10
ppo01230 Biosynthesis of amino acids 9
ppo00270 Cysteine and methionine metabolism 8
ppo01200 Carbon metabolism 6
ppo01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00520 Amino sugar and nucleotide sugar metabolism 4
ppo01250 Biosynthesis of nucleotide sugars 4
ppo00053 Ascorbate and aldarate metabolism 3
ppo01240 Biosynthesis of cofactors 3
ppo00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 4
ghi00520 Amino sugar and nucleotide sugar metabolism 3
ghi01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 3
ghi01250 Biosynthesis of nucleotide sugars 3
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00531 Glycosaminoglycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00270 Cysteine and methionine metabolism 4
sbi01230 Biosynthesis of amino acids 4
sbi00670 One carbon pool by folate 3
sbi00999 Biosynthesis of various plant secondary metabolites 3
sbi01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 2
nta04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829842 836858 100804618 100777505 778207 4341895 103629620 606446 103829526 103861947 100266466 7476399 7462594 11408559 25493486 123156518 123170097 123407014 107931672 107932565 106366787 106439348 8063780 102581104 102627060 100828169 107796855 107769571
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