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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7467027   pentatricopeptide repeat-containing protein At3g14730 
 gma-u.5   100805122   pentatricopeptide repeat-containing protein At3g14730 
 gma-u.5   100778693   protein BONZAI 1 
 mtr-u.5   25493389   pentatricopeptide repeat-containing protein At3g14730 
 ath-u.5   AT3G14730   Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5   100262464   pentatricopeptide repeat-containing protein At3g14730 
 sly-u.5   101254106   pentatricopeptide repeat-containing protein At3g14730 
 osa-u.5   9266068   pentatricopeptide repeat-containing protein At3g14730 

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Top 50 coexpressed genes to 7467027 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7467027 (ppo-m.4 coexpression data)

CoexMap"7467027"


ppoLOC7467027 | Entrez gene ID : 7467027    
Species ppo gma mtr ath vvi sly osa cre ghi cit hvu bdi sot bra sbi tae nta zma bna
Paralog 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024459202.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_024459202.2)
Subcellular
localization
TargetP
other 2  (predict for XP_024459202.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7467027

.
gma-u.5
for
100805122

.
gma-u.5
for
100778693

.
mtr-u.5
for
25493389

.
ath-u.5
for
AT3G14730

.
vvi-u.5
for
100262464

.
sly-u.5
for
101254106

.
osa-u.5
for
9266068

.


Ortholog ID: 11300
Species ath gma gma sly osa bra vvi mtr hvu ghi ghi sbi sot cit bdi nta nta
Symbol AT3G14730 LOC100805122 LOC100778693 LOC101254106 LOC9266068 LOC103841841 LOC100262464 LOC25493389 LOC123444708 LOC121217694 LOC107958466 LOC8055300 LOC102579314 LOC102612831 LOC104583342 LOC107775002 LOC107788401
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g14730 protein BONZAI 1 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730 pentatricopeptide repeat-containing protein At3g14730-like pentatricopeptide repeat-containing protein At3g14730-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00590 Arachidonic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta00190 Oxidative phosphorylation 2
nta00860 Porphyrin metabolism 2
nta01240 Biosynthesis of cofactors 2
nta03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
nta03030 DNA replication 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820701 100805122 100778693 101254106 9266068 103841841 100262464 25493389 123444708 121217694 107958466 8055300 102579314 102612831 104583342 107775002 107788401
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