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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7476042   pentatricopeptide repeat-containing protein At2g27610 
 gma-u.5   100789543   pentatricopeptide repeat-containing protein At2g01510, mitochondrial 
 gma-u.5   100801400   lysine--tRNA ligase 
 mtr-u.5   25501870   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 ghi-r.1   107962736   pentatricopeptide repeat-containing protein At2g22070 
 cit-r.1   102615482   putative pentatricopeptide repeat-containing protein At1g68930 

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Top 50 coexpressed genes to 7476042 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7476042 (ppo-m.4 coexpression data)

CoexMap"7476042"


ppoLOC7476042 | Entrez gene ID : 7476042    
Species ppo gma mtr ghi cit sot hvu tae sbi vvi sly zma bdi cre ath nta osa bna bra
Paralog 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002325018.4 [sequence] [blastp]
XP_052304832.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  E.R. 3,  mito 1,  plas 1,  mito_plas 1,  cyto_E.R. 1  (predict for XP_002325018.4)
chlo 6,  nucl 1,  mito 1,  extr 1,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for XP_052304832.1)
Subcellular
localization
TargetP
other 5,  mito 3  (predict for XP_002325018.4)
other 6,  mito 5  (predict for XP_052304832.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7476042
gma-u.5
for
100789543
gma-u.5
for
100801400
mtr-u.5
for
25501870
ghi-r.1
for
107962736
cit-r.1
for
102615482


Ortholog ID: 16432
Species gma gma mtr ghi cit
Symbol LOC100789543 LOC100801400 LOC25501870 LOC107962736 LOC102615482
Function* pentatricopeptide repeat-containing protein At2g01510, mitochondrial lysine--tRNA ligase pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At2g22070 putative pentatricopeptide repeat-containing protein At1g68930
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03020 RNA polymerase 2
mtr03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100789543 100801400 25501870 107962736 102615482
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