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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7476867   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 gma-u.5   100777780   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 mtr-u.5   11431268   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 ath-u.5   OTP86   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   100853812   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 sly-u.5   101265961   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 
 osa-u.5   4336112   pentatricopeptide repeat-containing protein At3g63370, chloroplastic 

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Top 50 coexpressed genes to 7476867 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7476867 (ppo-m.4 coexpression data)

CoexMap"7476867"


ppoLOC7476867 | Entrez gene ID : 7476867    
Species ppo gma mtr ath vvi sly osa sbi nta bra cre hvu cit bdi sot zma tae bna ghi
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002306801.3 [sequence] [blastp]
XP_024458120.1 [sequence] [blastp]
XP_024458121.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  E.R. 2,  extr 1,  E.R._vacu 1,  cyto_E.R. 1,  nucl 1,  cysk_nucl 1,  E.R._plas 1  (predict for XP_002306801.3)
chlo 3,  E.R. 2,  extr 1,  E.R._vacu 1,  cyto_E.R. 1,  nucl 1,  cysk_nucl 1,  E.R._plas 1  (predict for XP_024458120.1)
chlo 3,  E.R. 2,  extr 1,  E.R._vacu 1,  cyto_E.R. 1,  nucl 1,  cysk_nucl 1,  E.R._plas 1  (predict for XP_024458121.1)
Subcellular
localization
TargetP
other 3  (predict for XP_002306801.3)
other 3  (predict for XP_024458120.1)
other 3  (predict for XP_024458121.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7476867

.
gma-u.5
for
100777780

.
mtr-u.5
for
11431268

.
ath-u.5
for
OTP86

.
vvi-u.5
for
100853812

.
sly-u.5
for
101265961

.
osa-u.5
for
4336112

.


Ortholog ID: 11977
Species ath gma sly osa vvi mtr tae hvu ghi ghi bna sbi sot cit bdi nta nta
Symbol OTP86 LOC100777780 LOC101265961 LOC4336112 LOC100853812 LOC11431268 LOC123053589 LOC123426970 LOC107950887 LOC107915329 LOC106396743 LOC8058681 LOC102603734 LOC102617775 LOC100832010 LOC107785013 LOC107791344
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic pentatricopeptide repeat-containing protein At3g63370, chloroplastic-like pentatricopeptide repeat-containing protein At3g63370, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 3
hvu00860 Porphyrin metabolism 2
hvu01240 Biosynthesis of cofactors 2
hvu00300 Lysine biosynthesis 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825512 100777780 101265961 4336112 100853812 11431268 123053589 123426970 107950887 107915329 106396743 8058681 102603734 102617775 100832010 107785013 107791344
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