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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7477215   probable polygalacturonase 
 ppo-r.4   7477215   probable polygalacturonase 
 ppo-m.4   7477215   probable polygalacturonase 
 ppo-u.5   18101890   probable polygalacturonase 
 gma-u.5   100797678   probable polygalacturonase 
 gma-u.5   100801823   probable polygalacturonase 
 mtr-u.5   11420255   probable polygalacturonase 
 mtr-u.5   25488046   probable polygalacturonase 
 ath-u.5   AT3G06770   Pectin lyase-like superfamily protein 
 ath-u.5   AT3G16850   Pectin lyase-like superfamily protein 
 ath-u.5   AT5G49215   Pectin lyase-like superfamily protein 
 vvi-u.5   109122642   probable polygalacturonase 
 vvi-u.5   100241496   probable polygalacturonase 
 vvi-u.5   100247060   probable polygalacturonase 
 sly-u.5   101268765   probable polygalacturonase 
 sly-u.5   101264974   probable polygalacturonase 
 osa-u.5   4351055   probable polygalacturonase 
 osa-u.5   4352486   probable polygalacturonase 
 zma-u.5   100282607   polygalacturonase 
 zma-u.5   100191454   uncharacterized LOC100191454 

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Top 50 coexpressed genes to 7477215 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7477215 (ppo-u.5 coexpression data)

CoexMap"7477215"


ppoLOC7477215 | Entrez gene ID : 7477215    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 2 3 3 2 2 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (863 genes)  IEA  
GO CC
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (77 genes)  IEA  
Protein XP_002314352.3 [sequence] [blastp]
Subcellular
localization
wolf
vacu 4,  chlo 1,  cyto 1,  mito 1,  chlo_mito 1  (predict for XP_002314352.3)
Subcellular
localization
TargetP
scret 8,  other 3  (predict for XP_002314352.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7477215

.
ppo-r.4
for
7477215

.
ppo-m.4
for
7477215

.
ppo-u.5
for
18101890

.
gma-u.5
for
100797678

.
gma-u.5
for
100801823

.
mtr-u.5
for
11420255

.
mtr-u.5
for
25488046

.
ath-u.5
for
AT3G06770

.
ath-u.5
for
AT3G16850

.
ath-u.5
for
AT5G49215

.
vvi-u.5
for
109122642

.
vvi-u.5
for
100241496

.
vvi-u.5
for
100247060

.
sly-u.5
for
101268765

.
sly-u.5
for
101264974

.
osa-u.5
for
4351055

.
osa-u.5
for
4352486

.
zma-u.5
for
100282607

.
zma-u.5
for
100191454

.


Ortholog ID: 2332
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot sot cit bdi bdi nta nta
Symbol AT3G06770 AT5G49215 LOC100801823 LOC100777503 LOC101268765 LOC101264974 LOC4351055 LOC4352486 LOC100191454 LOC100282607 LOC103869730 LOC103875025 LOC100247060 LOC109122642 LOC18101890 LOC7477215 LOC11420255 LOC25488046 LOC123096876 LOC123091797 LOC123395463 LOC107888934 LOC107940911 LOC106403076 LOC106439444 LOC8070181 LOC102580232 LOC102598202 LOC102624542 LOC100846127 LOC100822979 LOC142179336 LOC107764241
Function* Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase uncharacterized LOC100191454 polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase-like probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase putative polygalacturonase putative polygalacturonase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00520 Amino sugar and nucleotide sugar metabolism 4
osa01250 Biosynthesis of nucleotide sugars 4
osa04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04145 Phagosome 2
zma04517 IgSF CAM signaling 2
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00520 Amino sugar and nucleotide sugar metabolism 2
ppo00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00511 Other glycan degradation 3
tae00513 Various types of N-glycan biosynthesis 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae00531 Glycosaminoglycan degradation 3
tae00600 Sphingolipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00511 Other glycan degradation 3
tae00513 Various types of N-glycan biosynthesis 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae00531 Glycosaminoglycan degradation 3
tae00600 Sphingolipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
sbi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04145 Phagosome 4
sot04517 IgSF CAM signaling 4
sot04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00760 Nicotinate and nicotinamide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819862 834981 100801823 100777503 101268765 101264974 4351055 4352486 100191454 100282607 103869730 103875025 100247060 109122642 18101890 7477215 11420255 25488046 123096876 123091797 123395463 107888934 107940911 106403076 106439444 8070181 102580232 102598202 102624542 100846127 100822979 142179336 107764241
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