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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7478071   elongation factor Tu, chloroplastic 
 ppo-r.4   7478071   elongation factor Tu, chloroplastic 
 ppo-m.4   7478071   elongation factor Tu, chloroplastic 
 ppo-u.5   7479258   elongation factor Tu, chloroplastic 
 gma-u.5   100805960   elongation factor Tu, chloroplastic-like 
 gma-u.5   TUFA   elongation factor Tu, chloroplastic 
 gma-u.5   TUFB1   elongation factor Tu 
 mtr-u.5   11412641   elongation factor Tu, chloroplastic 
 vvi-u.5   100244975   elongation factor TuB, chloroplastic 
 vvi-u.5   100245586   elongation factor Tu, chloroplastic 
 sly-u.5   101259256   elongation factor TuB, chloroplastic 
 sly-u.5   101245244   elongation factor Tu, chloroplastic 
 osa-u.5   9270837   elongation factor Tu, chloroplastic 
 zma-u.5   100283194   uncharacterized LOC100283194 
 zma-u.5   100284040   elongation factor Tu 

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Top 50 coexpressed genes to 7478071 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7478071 (ppo-u.5 coexpression data)

CoexMap"7478071"


ppoLOC7478071 | Entrez gene ID : 7478071    
Species ppo gma mtr vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae ath bna ghi
Paralog 4 3 1 2 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop04626 [list] [network] Plant-pathogen interaction (275 genes)
GO BP
GO:0070125 [list] [network] mitochondrial translational elongation  (8 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (675 genes)  IEA  
GO MF
GO:0003746 [list] [network] translation elongation factor activity  (32 genes)  IEA  
GO:0003924 [list] [network] GTPase activity  (264 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (290 genes)  IEA  
Protein XP_002298064.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_002298064.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_002298064.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7478071

.
ppo-r.4
for
7478071

.
ppo-m.4
for
7478071

.
ppo-u.5
for
7479258

.
gma-u.5
for
100805960

.
gma-u.5
for
TUFA

.
gma-u.5
for
TUFB1

.
mtr-u.5
for
11412641

.
vvi-u.5
for
100244975

.
vvi-u.5
for
100245586

.
sly-u.5
for
101259256

.
sly-u.5
for
101245244

.
osa-u.5
for
9270837

.
zma-u.5
for
100283194

.
zma-u.5
for
100284040

.


Ortholog ID: 4266
Species gma gma sly sly osa zma zma bra bra vvi vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot sot cit bdi nta nta
Symbol TUFB1 LOC100805960 LOC101245244 LOC101259256 LOC9270837 LOC100283194 LOC100284040 LOC103834158 LOC103827888 LOC100245586 LOC100244975 LOC7478071 LOC7479258 LOC11412641 LOC123127593 LOC123137329 LOC123401530 LOC107949645 LOC107886217 LOC125583874 LOC106375704 LOC8056476 LOC102584165 LOC102585459 LOC102625264 LOC100830133 LOC107820323 LOC107822214
Function* elongation factor Tu elongation factor Tu, chloroplastic-like elongation factor Tu, chloroplastic elongation factor TuB, chloroplastic elongation factor Tu, chloroplastic uncharacterized LOC100283194 elongation factor Tu elongation factor Tu, chloroplastic-like elongation factor Tu, chloroplastic elongation factor Tu, chloroplastic elongation factor TuB, chloroplastic elongation factor Tu, chloroplastic elongation factor Tu, chloroplastic elongation factor Tu, chloroplastic elongation factor Tu, chloroplastic elongation factor Tu, chloroplastic elongation factor Tu, chloroplastic elongation factor Tu, chloroplastic elongation factor Tu, chloroplastic elongation factor Tu, chloroplastic-like elongation factor Tu, chloroplastic elongation factor Tu, chloroplastic elongation factor TuB, chloroplastic elongation factor TuA, chloroplastic elongation factor Tu, chloroplastic elongation factor Tu, chloroplastic elongation factor TuB, chloroplastic elongation factor TuB, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma00195 Photosynthesis 3
gma00190 Oxidative phosphorylation 2
gma04626 Plant-pathogen interaction 2
gma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly00970 Aminoacyl-tRNA biosynthesis 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 2
osa04141 Protein processing in endoplasmic reticulum 2
osa04626 Plant-pathogen interaction 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 7
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 3
zma04626 Plant-pathogen interaction 2
zma00906 Carotenoid biosynthesis 2
zma00010 Glycolysis / Gluconeogenesis 2
zma00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00030 Pentose phosphate pathway 4
bra00710 Carbon fixation by Calvin cycle 4
bra01200 Carbon metabolism 4
bra01230 Biosynthesis of amino acids 4
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 4
vvi03010 Ribosome 4
vvi01240 Biosynthesis of cofactors 3
vvi01200 Carbon metabolism 3
vvi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00710 Carbon fixation by Calvin cycle 7
vvi01200 Carbon metabolism 7
vvi00195 Photosynthesis 3
vvi00190 Oxidative phosphorylation 2
vvi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo01230 Biosynthesis of amino acids 2
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 4
ppo00630 Glyoxylate and dicarboxylate metabolism 3
ppo00710 Carbon fixation by Calvin cycle 3
ppo01230 Biosynthesis of amino acids 3
ppo00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 3
tae00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae04626 Plant-pathogen interaction 3
tae00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 4
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01230 Biosynthesis of amino acids 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 10
bna00785 Lipoic acid metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
sbi00010 Glycolysis / Gluconeogenesis 2
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
cit03010 Ribosome 3
cit00030 Pentose phosphate pathway 2
cit00710 Carbon fixation by Calvin cycle 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 4
bdi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 6
nta04626 Plant-pathogen interaction 4
nta00620 Pyruvate metabolism 4
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta00710 Carbon fixation by Calvin cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 4
nta00270 Cysteine and methionine metabolism 3
nta00620 Pyruvate metabolism 3
nta00710 Carbon fixation by Calvin cycle 3
nta01200 Carbon metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100791320 100805960 101245244 101259256 9270837 100283194 100284040 103834158 103827888 100245586 100244975 7478071 7479258 11412641 123127593 123137329 123401530 107949645 107886217 125583874 106375704 8056476 102584165 102585459 102625264 100830133 107820323 107822214
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