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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7478386   nuclear pore complex protein NUP50A 
 ppo-r.4   7478386   nuclear pore complex protein NUP50A 
 ppo-m.4   7478386   nuclear pore complex protein NUP50A 
 ppo-u.5   7486642   nuclear pore complex protein NUP50A 
 gma-u.5   100816316   nuclear pore complex protein NUP50A 
 gma-u.5   100797325   nuclear pore complex protein NUP50A 
 mtr-u.5   25491384   nuclear pore complex protein NUP50A 
 ath-u.5   AT3G15970   NUP50 (Nucleoporin 50 kDa) protein 
 ath-u.5   AT1G52380   NUP50 (Nucleoporin 50 kDa) protein 
 bra-r.6   103868506   nuclear pore complex protein NUP50A 
 bra-r.6   103871212   nuclear pore complex protein NUP50A 
 vvi-u.5   100265296   nuclear pore complex protein NUP50A 
 ghi-r.1   107951895   nuclear pore complex protein NUP50A 
 ghi-r.1   107951997   nuclear pore complex protein NUP50A 
 bna-r.1   106425220   nuclear pore complex protein NUP50A 
 bna-r.1   106406775   nuclear pore complex protein NUP50B 
 bna-r.1   106406380   nuclear pore complex protein NUP50A 
 cit-r.1   102623478   nuclear pore complex protein NUP50A 
 sly-u.5   101248860   nuclear pore complex protein NUP50A 
 sly-u.5   101246934   nuclear pore complex protein NUP50A 
 sot-r.1   102580884   nuclear pore complex protein NUP50A-like 
 sot-r.1   102602342   nuclear pore complex protein NUP50A 
 nta-r.1   107824286   nuclear pore complex protein NUP50B 
 nta-r.1   107801982   nuclear pore complex protein NUP50B 
 nta-r.1   107809007   nuclear pore complex protein NUP50B 
 osa-u.5   4338497   nuclear pore complex protein NUP50B 
 zma-u.5   100284246   uncharacterized LOC100284246 
 zma-u.5   100273971   Nuclear pore complex protein NUP50A 
 tae-r.2   123052775   nuclear pore complex protein NUP50B 
 tae-r.2   123129102   nuclear pore complex protein NUP50B 
 tae-r.2   123156512   nuclear pore complex protein NUP50A 
 hvu-r.1   123441037   nuclear pore complex protein NUP50A-like 
 hvu-r.1   123407230   nuclear pore complex protein NUP50A-like 
 sbi-r.1   8057557   nuclear pore complex protein NUP50B 
 sbi-r.1   8069511   nuclear pore complex protein NUP50A 
 bdi-r.1   100823443   nuclear pore complex protein NUP50A 
 bdi-r.1   100824162   nuclear pore complex protein NUP50A 
 cre-r.1   CHLRE_15g641000v5   uncharacterized protein 

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Top 50 coexpressed genes to 7478386 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7478386 (ppo-u.5 coexpression data)

CoexMap"7478386"


ppoLOC7478386 | Entrez gene ID : 7478386    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 1 2 2 1 2 3 1 2 2 3 1 2 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0046907 [list] [network] intracellular transport  (572 genes)  IEA  
GO CC
GO:0005643 [list] [network] nuclear pore  (51 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (6111 genes)  IEA  
GO MF
GO:0005096 [list] [network] GTPase activator activity  (74 genes)  IEA  
Protein XP_006385476.3 [sequence] [blastp]
XP_024453670.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  mito 3,  cyto_nucl 3,  cysk_nucl 3  (predict for XP_006385476.3)
nucl 6,  mito 3,  cyto_nucl 3,  cysk_nucl 3  (predict for XP_024453670.2)
Subcellular
localization
TargetP
other 7  (predict for XP_006385476.3)
other 7  (predict for XP_024453670.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7478386
ppo-r.4
for
7478386
ppo-m.4
for
7478386
ppo-u.5
for
7486642
gma-u.5
for
100816316
gma-u.5
for
100797325
mtr-u.5
for
25491384
ath-u.5
for
AT3G15970
ath-u.5
for
AT1G52380
bra-r.6
for
103868506
bra-r.6
for
103871212
vvi-u.5
for
100265296
ghi-r.1
for
107951895
ghi-r.1
for
107951997
bna-r.1
for
106425220
bna-r.1
for
106406775
bna-r.1
for
106406380
cit-r.1
for
102623478
sly-u.5
for
101248860
sly-u.5
for
101246934
sot-r.1
for
102580884
sot-r.1
for
102602342
nta-r.1
for
107824286
nta-r.1
for
107801982
nta-r.1
for
107809007
osa-u.5
for
4338497
zma-u.5
for
100284246
zma-u.5
for
100273971
tae-r.2
for
123052775
tae-r.2
for
123129102
tae-r.2
for
123156512
hvu-r.1
for
123441037
hvu-r.1
for
123407230
sbi-r.1
for
8057557
sbi-r.1
for
8069511
bdi-r.1
for
100823443
bdi-r.1
for
100824162
cre-r.1
for
CHLRE_15g641000v5


Ortholog ID: 4380
Species ppo ppo gma gma mtr ath ath bra bra vvi ghi ghi bna bna bna cit sly sly sot sot nta nta nta osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC7478386 LOC7486642 LOC100816316 LOC100797325 LOC25491384 AT3G15970 AT1G52380 LOC103868506 LOC103871212 LOC100265296 LOC107951895 LOC107951997 LOC106406775 LOC106345735 LOC125609491 LOC102623478 LOC101248860 LOC101246934 LOC102580884 LOC102602342 LOC107824286 LOC107801982 LOC107771430 LOC4338497 LOC100284246 LOC100273971 LOC123129102 LOC123156512 LOC123148929 LOC123441037 LOC123407230 LOC8057557 LOC8069511 LOC100823443 LOC100824162 CHLRE_15g641000v5
Function* nuclear pore complex protein NUP50A nuclear pore complex protein NUP50A nuclear pore complex protein NUP50A nuclear pore complex protein NUP50A nuclear pore complex protein NUP50A NUP50 (Nucleoporin 50 kDa) protein NUP50 (Nucleoporin 50 kDa) protein nuclear pore complex protein NUP50A nuclear pore complex protein NUP50A nuclear pore complex protein NUP50A nuclear pore complex protein NUP50A nuclear pore complex protein NUP50A nuclear pore complex protein NUP50B nuclear pore complex protein NUP50A nuclear pore complex protein NUP50A-like nuclear pore complex protein NUP50A nuclear pore complex protein NUP50A nuclear pore complex protein NUP50A nuclear pore complex protein NUP50A-like nuclear pore complex protein NUP50A nuclear pore complex protein NUP50B nuclear pore complex protein NUP50B nuclear pore complex protein NUP50B nuclear pore complex protein NUP50B uncharacterized LOC100284246 Nuclear pore complex protein NUP50A nuclear pore complex protein NUP50B nuclear pore complex protein NUP50A nuclear pore complex protein NUP50B nuclear pore complex protein NUP50A-like nuclear pore complex protein NUP50A-like nuclear pore complex protein NUP50B nuclear pore complex protein NUP50A nuclear pore complex protein NUP50A nuclear pore complex protein NUP50A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma03083 Polycomb repressive complex 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
bra04145 Phagosome 3
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 5
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 3
cit03010 Ribosome 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00520 Amino sugar and nucleotide sugar metabolism 2
sly01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 3
hvu03013 Nucleocytoplasmic transport 3
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 8
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7478386 7486642 100816316 100797325 25491384 820841 841668 103868506 103871212 100265296 107951895 107951997 106406775 106345735 125609491 102623478 101248860 101246934 102580884 102602342 107824286 107801982 107771430 4338497 100284246 100273971 123129102 123156512 123148929 123441037 123407230 8057557 8069511 100823443 100824162 5728617
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