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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7481579   transcription termination factor MTEF1, chloroplastic 
 ppo-r.4   7481579   transcription termination factor MTEF1, chloroplastic 
 ppo-u.5   18109089   transcription termination factor MTEF1, chloroplastic 
 ppo-u.5   7497062   transcription termination factor MTEF1, chloroplastic 
 gma-u.5   100804440   transcription termination factor MTEF1, chloroplastic 
 gma-u.5   100801948   transcription termination factor MTEF1, chloroplastic 
 gma-u.5   100794678   transcription termination factor MTEF1, chloroplastic 
 mtr-u.5   11415133   transcription termination factor MTEF1, chloroplastic 
 mtr-u.5   25486960   transcription termination factor MTEF1, chloroplastic 
 mtr-u.5   11422152   transcription termination factor MTEF1, chloroplastic 
 ath-u.5   EMB93   Mitochondrial transcription termination factor family protein 
 ath-u.5   AT2G34620   Mitochondrial transcription termination factor family protein 
 ath-u.5   EMB3114   Mitochondrial transcription termination factor family protein 
 vvi-u.5   100853685   transcription termination factor MTEF1, chloroplastic 
 vvi-u.5   100247222   transcription termination factor MTEF1, chloroplastic 
 vvi-u.5   100254596   transcription termination factor MTEF1, chloroplastic 
 sly-u.5   112941526   transcription termination factor MTEF1, chloroplastic 
 sly-u.5   101259687   transcription termination factor MTEF1, chloroplastic 
 sly-u.5   101255820   protein SEEDLING LETHAL 1, chloroplastic 
 osa-u.5   4329761   transcription termination factor MTEF1, chloroplastic 
 osa-u.5   4332887   protein SEEDLING LETHAL 1, chloroplastic 
 zma-u.5   100284573   mTERF-like protein 
 zma-u.5   100273894   uncharacterized LOC100273894 
 zma-u.5   103635234   uncharacterized LOC103635234 

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Top 50 coexpressed genes to 7481579 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7481579 (ppo-u.5 coexpression data)

CoexMap"7481579"


ppoLOC7481579 | Entrez gene ID : 7481579    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 3 3 3 3 3 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1948 genes)  IEA  
GO CC
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (569 genes)  IEA  
Protein XP_002315044.1 [sequence] [blastp]
XP_024467150.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 3  (predict for XP_002315044.1)
chlo 7,  mito 3  (predict for XP_024467150.1)
Subcellular
localization
TargetP
chlo 5,  other 3  (predict for XP_002315044.1)
chlo 5,  other 3  (predict for XP_024467150.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7481579

.
ppo-r.4
for
7481579

.
ppo-u.5
for
18109089

.
ppo-u.5
for
7497062

.
gma-u.5
for
100804440

.
gma-u.5
for
100801948

.
gma-u.5
for
100794678

.
mtr-u.5
for
11415133

.
mtr-u.5
for
25486960

.
mtr-u.5
for
11422152

.
ath-u.5
for
EMB93

.
ath-u.5
for
AT2G34620

.
ath-u.5
for
EMB3114

.
vvi-u.5
for
100853685

.
vvi-u.5
for
100247222

.
vvi-u.5
for
100254596

.
sly-u.5
for
112941526

.
sly-u.5
for
101259687

.
sly-u.5
for
101255820

.
osa-u.5
for
4329761

.
osa-u.5
for
4332887

.
zma-u.5
for
100284573

.
zma-u.5
for
100273894

.
zma-u.5
for
103635234

.


Ortholog ID: 1479
Species ath ath gma gma sly sly osa zma zma bra vvi vvi ppo mtr mtr tae tae hvu hvu ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta
Symbol AT2G34620 EMB93 LOC100794678 LOC100785219 LOC101255820 LOC101259687 LOC4329761 LOC103635234 LOC100284573 LOC103875451 LOC100254596 LOC100853685 LOC7497062 LOC11415133 LOC25486960 LOC123105312 LOC123092010 LOC123404150 LOC123452572 LOC107960139 LOC106396429 LOC106369326 CHLRE_12g542500v5 LOC110432040 LOC8070549 LOC102584074 LOC102603805 LOC102624544 LOC102618922 LOC100838407 LOC100829532 LOC107761928
Function* Mitochondrial transcription termination factor family protein Mitochondrial transcription termination factor family protein transcription termination factor MTEF1, chloroplastic mTERF domain-containing protein protein SEEDLING LETHAL 1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic uncharacterized LOC103635234 mTERF-like protein transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic-like transcription termination factor MTEF1, chloroplastic-like transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic uncharacterized protein transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic uncharacterized LOC102584074 uncharacterized LOC102603805 transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic transcription termination factor MTEF1, chloroplastic protein SEEDLING LETHAL 1, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 3
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00196 Photosynthesis - antenna proteins 12
sly00860 Porphyrin metabolism 5
sly00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 9
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 5
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 13
vvi00196 Photosynthesis - antenna proteins 5
vvi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 7
ppo00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
mtr03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 4
tae00710 Carbon fixation by Calvin cycle 4
tae01200 Carbon metabolism 4
tae00906 Carotenoid biosynthesis 3
tae00053 Ascorbate and aldarate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 4
hvu00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta00480 Glutathione metabolism 2
nta00195 Photosynthesis 2
nta00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818027 814834 100794678 100785219 101255820 101259687 4329761 103635234 100284573 103875451 100254596 100853685 7497062 11415133 25486960 123105312 123092010 123404150 123452572 107960139 106396429 106369326 5719523 110432040 8070549 102584074 102603805 102624544 102618922 100838407 100829532 107761928
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