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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7485656   RING-H2 finger protein ATL8 
 ppo-r.4   7485656   RING-H2 finger protein ATL8 
 ppo-m.4   7485656   RING-H2 finger protein ATL8 
 ppo-u.5   7492116   RING-H2 finger protein ATL8 
 ppo-u.5   7471753   RING-H2 finger protein ATL8 
 gma-u.5   100813341   RING-H2 finger protein ATL8 
 gma-u.5   100786769   RING-H2 finger protein ATL8 
 gma-u.5   100787383   RING-H2 finger protein ATL8 
 mtr-u.5   11411600   RING-H2 finger protein ATL80 
 mtr-u.5   11428288   RING-H2 finger protein ATL8 
 mtr-u.5   11405802   RING-H2 finger protein ATL8 
 ath-u.5   RHA3A   RING-H2 finger A3A 
 ath-u.5   ATL8   RING/U-box superfamily protein 
 vvi-u.5   100266753   RING-H2 finger protein ATL8 
 vvi-u.5   100260977   RING-H2 finger protein ATL80 
 sly-u.5   101254466   RING-H2 finger protein ATL80 
 sly-u.5   101264584   RING-H2 finger protein ATL8-like 
 sly-u.5   101265820   RING-H2 finger protein ATL80 
 osa-u.5   9266473   RING-H2 finger protein ATL80 
 osa-u.5   4347807   probable E3 ubiquitin-protein ligase ATL44 
 osa-u.5   4336787   probable E3 ubiquitin-protein ligase ATL44 
 zma-u.5   103629547   probable E3 ubiquitin-protein ligase ATL44 
 zma-u.5   100284205   uncharacterized LOC100284205 
 zma-u.5   100283712   RING-H2 finger protein ATL1R 

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Top 50 coexpressed genes to 7485656 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7485656 (ppo-u.5 coexpression data)

CoexMap"7485656"


ppoLOC7485656 | Entrez gene ID : 7485656    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 3 3 2 2 3 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_002306993.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  extr 1,  nucl 1,  mito 1  (predict for XP_002306993.2)
Subcellular
localization
TargetP
other 8  (predict for XP_002306993.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7485656

.
ppo-r.4
for
7485656

.
ppo-m.4
for
7485656

.
ppo-u.5
for
7492116

.
ppo-u.5
for
7471753

.
gma-u.5
for
100813341

.
gma-u.5
for
100786769

.
gma-u.5
for
100787383

.
mtr-u.5
for
11411600

.
mtr-u.5
for
11428288

.
mtr-u.5
for
11405802

.
ath-u.5
for
RHA3A

.
ath-u.5
for
ATL8

.
vvi-u.5
for
100266753

.
vvi-u.5
for
100260977

.
sly-u.5
for
101254466

.
sly-u.5
for
101264584

.
sly-u.5
for
101265820

.
osa-u.5
for
9266473

.
osa-u.5
for
4347807

.
osa-u.5
for
4336787

.
zma-u.5
for
103629547

.
zma-u.5
for
100284205

.
zma-u.5
for
100283712

.


Ortholog ID: 374
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae hvu ghi ghi bna sbi sbi sot sot cit bdi bdi nta nta
Symbol RHA3B AT1G20823 LOC100813341 LOC100786769 LOC101248283 LOC101254466 LOC9266473 LOC4330352 LOC100284205 LOC100283712 LOC103832100 LOC103845949 LOC100266753 LOC100260977 LOC7492116 LOC7471753 LOC11411600 LOC11428288 LOC123042069 LOC123451909 LOC107917879 LOC107922003 LOC111210253 LOC8060446 LOC8066387 LOC102600767 LOC102579592 LOC102610566 LOC100822098 LOC100829815 LOC107807258 LOC107765274
Function* RING-H2 finger A3B RING/U-box superfamily protein RING-H2 finger protein ATL8 RING-H2 finger protein ATL8 RING-H2 finger protein ATL8-like RING-H2 finger protein ATL80 RING-H2 finger protein ATL80 RING-H2 finger protein ATL80 uncharacterized LOC100284205 RING-H2 finger protein ATL1R RING-H2 finger protein ATL8 probable E3 ubiquitin-protein ligase ATL44 RING-H2 finger protein ATL8 RING-H2 finger protein ATL80 RING-H2 finger protein ATL8 RING-H2 finger protein ATL8 RING-H2 finger protein ATL80 RING-H2 finger protein ATL8 RING-H2 finger protein ATL74 probable E3 ubiquitin-protein ligase ATL44 RING-H2 finger protein ATL80 RING-H2 finger protein ATL80 RING-H2 finger protein ATL80-like RING-H2 finger protein ATL74 probable E3 ubiquitin-protein ligase ATL45 RING-H2 finger protein ATL8-like RING-H2 finger protein ATL80 RING-H2 finger protein ATL80 probable E3 ubiquitin-protein ligase ATL44 RING-H2 finger protein ATL80 RING-H2 finger protein ATL8 RING-H2 finger protein ATL80-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00250 Alanine, aspartate and glutamate metabolism 4
gma01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 4
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
nta03082 ATP-dependent chromatin remodeling 2
nta04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829700 838674 100813341 100786769 101248283 101254466 9266473 4330352 100284205 100283712 103832100 103845949 100266753 100260977 7492116 7471753 11411600 11428288 123042069 123451909 107917879 107922003 111210253 8060446 8066387 102600767 102579592 102610566 100822098 100829815 107807258 107765274
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