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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7487703   low-specificity L-threonine aldolase 1 
 ppo-u.5   7487180   low-specificity L-threonine aldolase 1 
 gma-u.5   100790890   L-allo-threonine aldolase-like 
 gma-u.5   100806463   probable low-specificity L-threonine aldolase 1 
 gma-u.5   100800811   probable low-specificity L-threonine aldolase 1 
 mtr-u.5   11405591   probable low-specificity L-threonine aldolase 1 
 mtr-u.5   25499717   probable low-specificity L-threonine aldolase 1 
 ath-u.5   THA2   threonine aldolase 2 
 ath-u.5   THA1   threonine aldolase 1 
 vvi-u.5   100265578   low-specificity L-threonine aldolase 1 
 sly-u.5   101247807   low-specificity L-threonine aldolase 1 
 osa-u.5   4336402   low-specificity L-threonine aldolase 1 
 zma-u.5   100272842   putative threonine aldolase family protein 
 zma-u.5   100282861   L-allo-threonine aldolase 
 zma-u.5   100274124   putative threonine aldolase family protein 

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Top 50 coexpressed genes to 7487703 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7487703 (ppo-m.4 coexpression data)

CoexMap"7487703"


ppoLOC7487703 | Entrez gene ID : 7487703    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 3 2 2 1 1 1 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00260 [list] [network] Glycine, serine and threonine metabolism (86 genes)
pop01230 [list] [network] Biosynthesis of amino acids (287 genes)
GO BP
GO:0006567 [list] [network] L-threonine catabolic process  (3 genes)  IEA  
GO:0006545 [list] [network] glycine biosynthetic process  (14 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (1141 genes)  IEA  
GO MF
GO:0008732 [list] [network] L-allo-threonine aldolase activity  (2 genes)  IEA  
Protein XP_002319106.3 [sequence] [blastp]
XP_024439174.1 [sequence] [blastp]
XP_024439175.1 [sequence] [blastp]
XP_024439176.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 1,  chlo_mito 1,  nucl 1,  pero 1  (predict for XP_002319106.3)
cyto 5,  nucl 1,  chlo_mito 1,  chlo 1,  mito 1,  E.R. 1,  pero 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_024439174.1)
cyto 4,  chlo 1,  chlo_mito 1,  nucl 1,  pero 1  (predict for XP_024439175.1)
cyto 4,  chlo 1,  chlo_mito 1,  nucl 1,  pero 1  (predict for XP_024439176.1)
Subcellular
localization
TargetP
other 5,  mito 3  (predict for XP_002319106.3)
mito 6,  other 5  (predict for XP_024439174.1)
other 5,  mito 3  (predict for XP_024439175.1)
other 5,  mito 3  (predict for XP_024439176.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7487703

.
ppo-u.5
for
7487180

.
gma-u.5
for
100790890

.
gma-u.5
for
100806463

.
gma-u.5
for
100800811

.
mtr-u.5
for
11405591

.
mtr-u.5
for
25499717

.
ath-u.5
for
THA2

.
ath-u.5
for
THA1

.
vvi-u.5
for
100265578

.
sly-u.5
for
101247807

.
osa-u.5
for
4336402

.
zma-u.5
for
100272842

.
zma-u.5
for
100282861

.
zma-u.5
for
100274124

.


Ortholog ID: 2548
Species ath ath gma gma sly osa zma zma bra bra vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol THA1 THA2 LOC100800811 LOC100806463 LOC101247807 LOC4336402 LOC100272842 LOC100274124 LOC103843388 LOC103871606 LOC100265578 LOC7487180 LOC11405591 LOC25499717 LOC123041826 LOC123093808 LOC123430695 LOC123449904 LOC107936772 LOC121223477 LOC106383126 LOC125575202 CHLRE_10g423550v5 LOC110436673 LOC102577840 LOC102610938 LOC100842610 LOC107820397 LOC107784859
Function* threonine aldolase 1 threonine aldolase 2 probable low-specificity L-threonine aldolase 1 probable low-specificity L-threonine aldolase 1 low-specificity L-threonine aldolase 1 low-specificity L-threonine aldolase 1 putative threonine aldolase family protein putative threonine aldolase family protein probable low-specificity L-threonine aldolase 1 probable low-specificity L-threonine aldolase 1 low-specificity L-threonine aldolase 1 low-specificity L-threonine aldolase 1 probable low-specificity L-threonine aldolase 1 probable low-specificity L-threonine aldolase 1 probable low-specificity L-threonine aldolase 2 probable low-specificity L-threonine aldolase 1 probable low-specificity L-threonine aldolase 2 probable low-specificity L-threonine aldolase 1 probable low-specificity L-threonine aldolase 1 probable low-specificity L-threonine aldolase 1 low-specificity L-threonine aldolase 1-like probable low-specificity L-threonine aldolase 2 uncharacterized protein probable low-specificity L-threonine aldolase 2 L-allo-threonine aldolase-related protein low-specificity L-threonine aldolase 1-like probable low-specificity L-threonine aldolase 2 low-specificity L-threonine aldolase 1-like low-specificity L-threonine aldolase 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 7
ath00250 Alanine, aspartate and glutamate metabolism 4
ath01210 2-Oxocarboxylic acid metabolism 4
ath01230 Biosynthesis of amino acids 3
ath00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00350 Tyrosine metabolism 2
ath04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 2
gma03460 Fanconi anemia pathway 2
gma00260 Glycine, serine and threonine metabolism 2
gma01230 Biosynthesis of amino acids 2
gma00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 6
gma04016 MAPK signaling pathway - plant 2
gma04626 Plant-pathogen interaction 2
gma00941 Flavonoid biosynthesis 2
gma00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00280 Valine, leucine and isoleucine degradation 5
sly00071 Fatty acid degradation 4
sly00310 Lysine degradation 3
sly01212 Fatty acid metabolism 3
sly00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00260 Glycine, serine and threonine metabolism 5
zma01230 Biosynthesis of amino acids 4
zma01210 2-Oxocarboxylic acid metabolism 4
zma01200 Carbon metabolism 4
zma00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 4
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00350 Tyrosine metabolism 4
bra00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
bra00360 Phenylalanine metabolism 3
bra04146 Peroxisome 2
bra00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 6
vvi01230 Biosynthesis of amino acids 4
vvi01200 Carbon metabolism 3
vvi00020 Citrate cycle (TCA cycle) 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
ppo03040 Spliceosome 2
ppo00480 Glutathione metabolism 2
ppo00071 Fatty acid degradation 2
ppo01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 7
mtr01210 2-Oxocarboxylic acid metabolism 4
mtr00640 Propanoate metabolism 3
mtr00785 Lipoic acid metabolism 3
mtr00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00240 Pyrimidine metabolism 2
mtr01232 Nucleotide metabolism 2
mtr01240 Biosynthesis of cofactors 2
mtr00260 Glycine, serine and threonine metabolism 2
mtr02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 8
tae00260 Glycine, serine and threonine metabolism 6
tae00280 Valine, leucine and isoleucine degradation 6
tae01210 2-Oxocarboxylic acid metabolism 6
tae00640 Propanoate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 4
tae01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 4
ghi01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 2
ghi00941 Flavonoid biosynthesis 2
ghi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 7
bna01230 Biosynthesis of amino acids 7
bna00270 Cysteine and methionine metabolism 2
bna00450 Selenocompound metabolism 2
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 4
sbi00260 Glycine, serine and threonine metabolism 3
sbi01240 Biosynthesis of cofactors 2
sbi00270 Cysteine and methionine metabolism 2
sbi00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00260 Glycine, serine and threonine metabolism 3
sot00270 Cysteine and methionine metabolism 3
sot00280 Valine, leucine and isoleucine degradation 3
sot01210 2-Oxocarboxylic acid metabolism 3
sot00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00785 Lipoic acid metabolism 2
bdi01200 Carbon metabolism 2
bdi00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 8
nta00052 Galactose metabolism 4
nta00260 Glycine, serine and threonine metabolism 4
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 8
nta00052 Galactose metabolism 4
nta00260 Glycine, serine and threonine metabolism 4
nta01250 Biosynthesis of nucleotide sugars 3
nta00520 Amino sugar and nucleotide sugar metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837385 819608 100800811 100806463 101247807 4336402 100272842 100274124 103843388 103871606 100265578 7487180 11405591 25499717 123041826 123093808 123430695 123449904 107936772 121223477 106383126 125575202 5728226 110436673 102577840 102610938 100842610 107820397 107784859
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