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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7498075   pentatricopeptide repeat-containing protein At4g14850 
 gma-u.5   100778632   pentatricopeptide repeat-containing protein At4g14850 
 mtr-u.5   25485202   pentatricopeptide repeat-containing protein At4g14850 
 mtr-u.5   11431827   pentatricopeptide repeat-containing protein At4g14850 
 ath-u.5   LOI1   Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5   100261298   pentatricopeptide repeat-containing protein At4g14850 
 sly-u.5   101260676   pentatricopeptide repeat-containing protein At4g14850 
 osa-u.5   4350793   pentatricopeptide repeat-containing protein At4g14850 

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Top 50 coexpressed genes to 7498075 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7498075 (ppo-m.4 coexpression data)

CoexMap"7498075"


ppoLOC7498075 | Entrez gene ID : 7498075    
Species ppo gma mtr ath vvi sly osa sbi nta bra cre hvu cit bdi sot zma tae bna ghi
Paralog 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002314694.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_002314694.3)
Subcellular
localization
TargetP
other 3  (predict for XP_002314694.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7498075

.
gma-u.5
for
100778632

.
mtr-u.5
for
25485202

.
mtr-u.5
for
11431827

.
ath-u.5
for
LOI1

.
vvi-u.5
for
100261298

.
sly-u.5
for
101260676

.
osa-u.5
for
4350793

.


Ortholog ID: 10854
Species ath gma sly osa bra vvi mtr mtr tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol LOI1 LOC100778632 LOC101260676 LOC4350793 LOC103868345 LOC100261298 LOC25485202 LOC11431827 LOC123132442 LOC123405180 LOC107955636 LOC107954871 LOC106411027 LOC106402954 LOC8081315 LOC102578590 LOC102608673 LOC100823088 LOC107796050 LOC107767133
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850-like pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850 pentatricopeptide repeat-containing protein At4g14850-like pentatricopeptide repeat-containing protein At4g14850-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
cit03020 RNA polymerase 2
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827142 100778632 101260676 4350793 103868345 100261298 25485202 11431827 123132442 123405180 107955636 107954871 106411027 106402954 8081315 102578590 102608673 100823088 107796050 107767133
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