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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8065281   transforming growth factor-beta receptor-associated protein 1 
 zma-u.5   103629298   uncharacterized LOC103629298 
 osa-u.5   4337547   vacuolar sorting protein 3 
 ath-u.5   AT1G22860   Vacuolar sorting protein 39 
 gma-u.5   100819895   vacuolar sorting protein 3 
 gma-u.5   100777041   vacuolar sorting protein 3 
 sly-u.5   101266820   vacuolar sorting protein 3 
 vvi-u.5   100251277   vacuolar sorting protein 3 
 ppo-u.5   18097065   vacuolar sorting protein 3 
 ppo-u.5   18094463   vacuolar sorting protein 3 
 mtr-u.5   25500269   vacuolar sorting protein 3 

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Top 50 coexpressed genes to 8065281 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8065281 (sbi-r.1 coexpression data)

CoexMap"8065281"


sbiLOC8065281 | Entrez gene ID : 8065281      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi04148 [list] [network] Efferocytosis (53 genes)
GO BP
GO:0034058 [list] [network] endosomal vesicle fusion  (4 genes)  IEA  
GO:0006914 [list] [network] autophagy  (53 genes)  IEA  
GO:0006886 [list] [network] intracellular protein transport  (256 genes)  IEA  
GO:0016192 [list] [network] vesicle-mediated transport  (412 genes)  IEA  
GO CC
GO:0016020 [list] [network] membrane  (3172 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
Protein XP_002439096.1 [sequence] [blastp]
XP_021303247.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  plas 2,  nucl 1,  cyto 1,  cyto_nucl 1,  E.R._plas 1  (predict for XP_002439096.1)
chlo 4,  plas 2,  nucl 1,  cyto 1,  cyto_nucl 1,  E.R._plas 1  (predict for XP_021303247.1)
Subcellular
localization
TargetP
other 3  (predict for XP_002439096.1)
other 3  (predict for XP_021303247.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8065281

.
zma-u.5
for
103629298

.
osa-u.5
for
4337547

.
ath-u.5
for
AT1G22860

.
gma-u.5
for
100819895

.
gma-u.5
for
100777041

.
sly-u.5
for
101266820

.
vvi-u.5
for
100251277

.
ppo-u.5
for
18097065

.
ppo-u.5
for
18094463

.
mtr-u.5
for
25500269

.


Ortholog ID: 10470
Species ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G22860 LOC100777041 LOC100819895 LOC101266820 LOC4337547 LOC103629298 LOC103840821 LOC100251277 LOC18094463 LOC18097065 LOC25500269 LOC123179815 LOC123185130 LOC123427537 LOC107916434 LOC106429786 LOC106400910 CHLRE_17g709400v5 LOC8065281 LOC102605531 LOC102615461 LOC100836335 LOC107796837 LOC107801254
Function* Vacuolar sorting protein 39 vacuolar sorting protein 3 vacuolar sorting protein 3 vacuolar sorting protein 3 vacuolar sorting protein 3 uncharacterized LOC103629298 vacuolar sorting protein 3 vacuolar sorting protein 3 vacuolar sorting protein 3 vacuolar sorting protein 3 vacuolar sorting protein 3 vacuolar sorting protein 3 vacuolar sorting protein 3 vacuolar sorting protein 3 vacuolar sorting protein 3 vacuolar sorting protein 3 vacuolar sorting protein 3 uncharacterized protein transforming growth factor-beta receptor-associated protein 1 transforming growth factor-beta receptor-associated protein 1-like vacuolar sorting protein 3 transforming growth factor-beta receptor-associated protein 1 vacuolar sorting protein 3 vacuolar sorting protein 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
gma03040 Spliceosome 3
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 7
zma03420 Nucleotide excision repair 3
zma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04148 Efferocytosis 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
mtr04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04148 Efferocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 6
tae03250 Viral life cycle - HIV-1 3
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00562 Inositol phosphate metabolism 4
bna04070 Phosphatidylinositol signaling system 4
bna04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta00510 N-Glycan biosynthesis 4
nta04141 Protein processing in endoplasmic reticulum 4
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03082 ATP-dependent chromatin remodeling 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta04148 Efferocytosis 2
nta00510 N-Glycan biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838891 100777041 100819895 101266820 4337547 103629298 103840821 100251277 18094463 18097065 25500269 123179815 123185130 123427537 107916434 106429786 106400910 5717156 8065281 102605531 102615461 100836335 107796837 107801254
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