ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	8075860	PHD finger protein ALFIN-LIKE 7
sbi-r.1	8057052	PHD finger protein ALFIN-LIKE 3
sbi-r.1	8078469	PHD finger protein ALFIN-LIKE 2
sbi-r.1	8072592	PHD finger protein ALFIN-LIKE 7
zma-u.5	100193399	ALFIN-like transcription factor
zma-u.5	100283532	uncharacterized LOC100283532
zma-u.5	100273857	uncharacterized LOC100273857
osa-u.5	4343868	PHD finger protein ALFIN-LIKE 9-like
osa-u.5	9269003	PHD finger protein ALFIN-LIKE 7-like
osa-u.5	4342784	PHD finger protein ALFIN-LIKE 2-like
tae-r.2	123071781	PHD finger protein ALFIN-LIKE 6
tae-r.2	123056239	PHD finger protein ALFIN-LIKE 5
tae-r.2	123044245	PHD finger protein ALFIN-LIKE 9
hvu-r.1	123425355	PHD finger protein ALFIN-LIKE 9-like
hvu-r.1	123453008	PHD finger protein ALFIN-LIKE 3-like
hvu-r.1	123445099	PHD finger protein ALFIN-LIKE 6-like
bdi-r.1	100826274	PHD finger protein ALFIN-LIKE 8
bdi-r.1	100831618	PHD finger protein ALFIN-LIKE 9
bdi-r.1	100834175	PHD finger protein ALFIN-LIKE 3
ath-u.5	AL4	alfin-like 4
ath-u.5	AL6	alfin-like 6
ath-u.5	AL2	alfin-like 2
gma-u.5	100170696	PHD finger protein
gma-u.5	PHD4	PHD finger superfamily protein
gma-u.5	100170698	PHD5
sly-u.5	101259267	PHD finger protein ALFIN-LIKE 4
sly-u.5	101251316	PHD finger protein ALFIN-LIKE 1
sly-u.5	101250743	alfin1-like PHD domain-containing protein
bra-r.6	103842964	PHD finger protein ALFIN-LIKE 7
bra-r.6	103839442	PHD finger protein ALFIN-LIKE 6
vvi-u.5	100852794	PHD finger protein ALFIN-LIKE 4
vvi-u.5	100251933	PHD finger protein ALFIN-LIKE 1
vvi-u.5	100263503	PHD finger protein ALFIN-LIKE 4
ppo-u.5	7497594	PHD finger protein ALFIN-LIKE 4
ppo-u.5	18109476	PHD finger protein Alfin1
ppo-u.5	7496695	PHD finger protein ALFIN-LIKE 4
mtr-u.5	25481987	PHD finger protein ALFIN-LIKE 4
mtr-u.5	25491446	PHD finger protein ALFIN-LIKE 1
mtr-u.5	25486461	PHD finger protein ALFIN-LIKE 4
ghi-r.1	107907038	PHD finger protein ALFIN-LIKE 4
ghi-r.1	107905795	PHD finger protein ALFIN-LIKE 7
ghi-r.1	107903455	PHD finger protein ALFIN-LIKE 1
bna-r.1	106440363	PHD finger protein ALFIN-LIKE 4
bna-r.1	106452544	PHD finger protein ALFIN-LIKE 2
sot-r.1	102600287	PHD finger protein ALFIN-LIKE 4-like
sot-r.1	102583083	PHD finger protein ALFIN-LIKE 2-like
sot-r.1	102590033	PHD finger protein Alfin1-like
cit-r.1	102612029	PHD finger protein ALFIN-LIKE 7
cit-r.1	102628070	PHD finger protein ALFIN-LIKE 2-like
cit-r.1	102609956	PHD finger protein ALFIN-LIKE 4
nta-r.1	107787715	PHD finger protein ALFIN-LIKE 4-like
nta-r.1	107792882	PHD finger protein Alfin1-like
nta-r.1	107790155	PHD finger protein ALFIN-LIKE 1-like
cre-r.1	CHLRE_07g357650v5	uncharacterized protein
cre-r.1	CHLRE_10g441050v5	uncharacterized protein
cre-r.1	CHLRE_07g320950v5	uncharacterized protein

Top 50 coexpressed genes to 8075860 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 8075860 (sbi-r.1 coexpression data)

CoexMap"8075860"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006355 [list] [network] regulation of DNA-templated transcription

(1596 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(2977 genes)

IEA

GO MF

GO:0042393 [list] [network] histone binding	(50 genes)	IEA
GO:0003712 [list] [network] transcription coregulator activity	(113 genes)	IEA
GO:0000976 [list] [network] transcription cis-regulatory region binding	(353 genes)	IEA

Protein

XP_021318284.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, chlo 4, nucl 1, mito 1, extr 1

(predict for XP_021318284.1)

Subcellular
localization
TargetP

other 9

(predict for XP_021318284.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 8075860	sbi-r.1 for 8057052	sbi-r.1 for 8078469	sbi-r.1 for 8072592	zma-u.5 for 100193399	zma-u.5 for 100283532	zma-u.5 for 100273857	osa-u.5 for 4343868	osa-u.5 for 9269003	osa-u.5 for 4342784	tae-r.2 for 123071781	tae-r.2 for 123056239	tae-r.2 for 123044245	hvu-r.1 for 123425355	hvu-r.1 for 123453008	hvu-r.1 for 123445099	bdi-r.1 for 100826274	bdi-r.1 for 100831618	bdi-r.1 for 100834175	ath-u.5 for AL4	ath-u.5 for AL6	ath-u.5 for AL2	gma-u.5 for 100170696	gma-u.5 for PHD4	gma-u.5 for 100170698	sly-u.5 for 101259267	sly-u.5 for 101251316	sly-u.5 for 101250743	bra-r.6 for 103842964	bra-r.6 for 103839442	vvi-u.5 for 100852794	vvi-u.5 for 100251933	vvi-u.5 for 100263503	ppo-u.5 for 7497594	ppo-u.5 for 18109476	ppo-u.5 for 7496695	mtr-u.5 for 25481987	mtr-u.5 for 25491446	mtr-u.5 for 25486461	ghi-r.1 for 107907038	ghi-r.1 for 107905795	ghi-r.1 for 107903455	bna-r.1 for 106440363	bna-r.1 for 106452544	sot-r.1 for 102600287	sot-r.1 for 102583083	sot-r.1 for 102590033	cit-r.1 for 102612029	cit-r.1 for 102628070	cit-r.1 for 102609956	nta-r.1 for 107787715	nta-r.1 for 107792882	nta-r.1 for 107790155	cre-r.1 for CHLRE_07g357650v5	cre-r.1 for CHLRE_10g441050v5	cre-r.1 for CHLRE_07g320950v5

Ortholog

Ortholog ID: 163

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

AL2

AL3

AL7

FIN1

Function^*

PHD finger protein ALFIN-LIKE 1

PHD finger protein ALFIN-LIKE 8

PHD finger protein ALFIN-LIKE 6

uncharacterized LOC100283422

ALFIN-like transcription factor

uncharacterized LOC100192074

PHD finger protein ALFIN-LIKE 7-like

PHD finger protein ALFIN-LIKE 2-like

PHD finger protein ALFIN-LIKE 6-like

PHD finger protein ALFIN-LIKE 9

PHD finger protein ALFIN-LIKE 8

PHD finger protein ALFIN-LIKE 3

PHD finger protein ALFIN-LIKE 9-like

PHD finger protein ALFIN-LIKE 2

PHD finger protein ALFIN-LIKE 8

PHD finger protein ALFIN-LIKE 2

PHD finger protein ALFIN-LIKE 6

PHD finger protein ALFIN-LIKE 1

alfin-like 2

alfin-like 3

alfin-like 7

PHD finger protein ALFIN-LIKE 1-like

PHD finger protein ALFIN-LIKE 5-like