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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8080148   tyrosyl-DNA phosphodiesterase 1 
 zma-u.5   100383136   Tyrosyl-DNA phosphodiesterase 1 
 osa-u.5   4343446   tyrosyl-DNA phosphodiesterase 1 
 tae-r.2   123188400   tyrosyl-DNA phosphodiesterase 1 
 tae-r.2   123052521   tyrosyl-DNA phosphodiesterase 1 
 tae-r.2   123044642   tyrosyl-DNA phosphodiesterase 1 
 hvu-r.1   123425840   tyrosyl-DNA phosphodiesterase 1 
 bdi-r.1   100840189   tyrosyl-DNA phosphodiesterase 1 
 ath-u.5   TDP1   tyrosyl-DNA phosphodiesterase-like protein 
 gma-u.5   100793746   tyrosyl-DNA phosphodiesterase 1 
 sly-u.5   101257338   tyrosyl-DNA phosphodiesterase 1 
 bra-r.6   103856120   tyrosyl-DNA phosphodiesterase 1 
 vvi-u.5   100247070   tyrosyl-DNA phosphodiesterase 1 
 ppo-u.5   7479095   tyrosyl-DNA phosphodiesterase 1 
 mtr-u.5   11437867   tyrosyl-DNA phosphodiesterase 1 
 ghi-r.1   107924901   tyrosyl-DNA phosphodiesterase 1 
 ghi-r.1   107935343   tyrosyl-DNA phosphodiesterase 1 
 bna-r.1   106431855   tyrosyl-DNA phosphodiesterase 1 
 bna-r.1   106432741   tyrosyl-DNA phosphodiesterase 1-like 
 sot-r.1   102604923   tyrosyl-DNA phosphodiesterase 1 
 cit-r.1   102627995   tyrosyl-DNA phosphodiesterase 1 
 nta-r.1   107791644   tyrosyl-DNA phosphodiesterase 1 
 nta-r.1   107813187   tyrosyl-DNA phosphodiesterase 1 
 cre-r.1   CHLRE_01g053200v5   uncharacterized protein 

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Top 50 coexpressed genes to 8080148 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8080148 (sbi-r.1 coexpression data)

CoexMap"8080148"


sbiLOC8080148 | Entrez gene ID : 8080148    
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 1 1 3 1 1 1 1 1 1 1 1 1 2 2 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03410 [list] [network] Base excision repair (51 genes)
GO BP
GO:0000012 [list] [network] single strand break repair  (3 genes)  IEA  
GO:0006302 [list] [network] double-strand break repair  (114 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO MF
GO:0017005 [list] [network] 3'-tyrosyl-DNA phosphodiesterase activity  (1 genes)  IEA  
GO:0003697 [list] [network] single-stranded DNA binding  (68 genes)  IEA  
GO:0003690 [list] [network] double-stranded DNA binding  (461 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_021309892.1 [sequence] [blastp]
XP_021309893.1 [sequence] [blastp]
XP_021309894.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  mito 1,  cyto 1,  plas 1,  cysk 1,  cyto_mito 1,  cysk_plas 1,  cyto_plas 1  (predict for XP_021309892.1)
nucl 4,  chlo 3,  mito 1,  cyto 1,  plas 1,  cysk 1,  cyto_mito 1,  cysk_plas 1,  cyto_plas 1  (predict for XP_021309893.1)
chlo 4,  nucl 3,  cyto 1,  mito 1,  plas 1,  cysk 1,  cysk_plas 1,  mito_plas 1,  cyto_plas 1  (predict for XP_021309894.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_021309892.1)
chlo 5  (predict for XP_021309893.1)
chlo 5  (predict for XP_021309894.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8080148
zma-u.5
for
100383136
osa-u.5
for
4343446
tae-r.2
for
123188400
tae-r.2
for
123052521
tae-r.2
for
123044642
hvu-r.1
for
123425840
bdi-r.1
for
100840189
ath-u.5
for
TDP1
gma-u.5
for
100793746
sly-u.5
for
101257338
bra-r.6
for
103856120
vvi-u.5
for
100247070
ppo-u.5
for
7479095
mtr-u.5
for
11437867
ghi-r.1
for
107924901
ghi-r.1
for
107935343
bna-r.1
for
106431855
bna-r.1
for
106432741
sot-r.1
for
102604923
cit-r.1
for
102627995
nta-r.1
for
107791644
nta-r.1
for
107813187
cre-r.1
for
CHLRE_01g053200v5


Ortholog ID: 10300
Species sbi zma osa tae tae tae hvu bdi ath gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC8080148 LOC100383136 LOC4343446 LOC123188400 LOC123052521 LOC123044642 LOC123425840 LOC100840189 TDP1 LOC100793746 LOC101257338 LOC103856120 LOC100247070 LOC7479095 LOC11437867 LOC107924901 LOC107935343 LOC106431855 LOC106432741 LOC102604923 LOC102627995 LOC107791644 LOC107813187 CHLRE_01g053200v5
Function* tyrosyl-DNA phosphodiesterase 1 Tyrosyl-DNA phosphodiesterase 1 tyrosyl-DNA phosphodiesterase 1 tyrosyl-DNA phosphodiesterase 1 tyrosyl-DNA phosphodiesterase 1 tyrosyl-DNA phosphodiesterase 1 tyrosyl-DNA phosphodiesterase 1 tyrosyl-DNA phosphodiesterase 1 tyrosyl-DNA phosphodiesterase-like protein tyrosyl-DNA phosphodiesterase 1 tyrosyl-DNA phosphodiesterase 1 tyrosyl-DNA phosphodiesterase 1 tyrosyl-DNA phosphodiesterase 1 tyrosyl-DNA phosphodiesterase 1 tyrosyl-DNA phosphodiesterase 1 tyrosyl-DNA phosphodiesterase 1 tyrosyl-DNA phosphodiesterase 1 tyrosyl-DNA phosphodiesterase 1 tyrosyl-DNA phosphodiesterase 1-like tyrosyl-DNA phosphodiesterase 1 tyrosyl-DNA phosphodiesterase 1 tyrosyl-DNA phosphodiesterase 1 tyrosyl-DNA phosphodiesterase 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03460 Fanconi anemia pathway 4
tae03410 Base excision repair 3
tae03020 RNA polymerase 3
tae03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03430 Mismatch repair 5
tae03460 Fanconi anemia pathway 5
tae03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03410 Base excision repair 3
tae03430 Mismatch repair 2
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03410 Base excision repair 4
bdi03450 Non-homologous end-joining 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 3
gma00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 5
bna03420 Nucleotide excision repair 4
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 9
bna03420 Nucleotide excision repair 7
bna04141 Protein processing in endoplasmic reticulum 3
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 8080148 100383136 4343446 123188400 123052521 123044642 123425840 100840189 831369 100793746 101257338 103856120 100247070 7479095 11437867 107924901 107935343 106431855 106432741 102604923 102627995 107791644 107813187 5715790
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