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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8084103   pentatricopeptide repeat-containing protein At3g46870 
 zma-u.5   100276080   uncharacterized LOC100276080 
 osa-u.5   4343537   protein THYLAKOID ASSEMBLY 8-like, chloroplastic 
 ath-u.5   AT3G46870   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100798492   protein THYLAKOID ASSEMBLY 8-like, chloroplastic 
 gma-u.5   100306428   pentatricopeptide repeat-containing protein 
 sly-u.5   101247961   protein THYLAKOID ASSEMBLY 8-like, chloroplastic 
 vvi-u.5   100262150   protein THYLAKOID ASSEMBLY 8-like, chloroplastic 
 vvi-u.5   100246751   protein THYLAKOID ASSEMBLY 8-like, chloroplastic 
 ppo-u.5   7468604   protein THYLAKOID ASSEMBLY 8-like, chloroplastic 
 mtr-u.5   25492548   protein THYLAKOID ASSEMBLY 8-like, chloroplastic 

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Top 50 coexpressed genes to 8084103 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8084103 (sbi-r.1 coexpression data)

CoexMap"8084103"


sbiLOC8084103 | Entrez gene ID : 8084103      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 2 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002462989.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 2  (predict for XP_002462989.1)
Subcellular
localization
TargetP
chlo 7,  mito 6  (predict for XP_002462989.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8084103

.
zma-u.5
for
100276080

.
osa-u.5
for
4343537

.
ath-u.5
for
AT3G46870

.
gma-u.5
for
100798492

.
gma-u.5
for
100306428

.
sly-u.5
for
101247961

.
vvi-u.5
for
100262150

.
vvi-u.5
for
100246751

.
ppo-u.5
for
7468604

.
mtr-u.5
for
25492548

.


Ortholog ID: 10131
Species ath gma gma sly osa zma bra vvi vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT3G46870 LOC100798492 LOC100306428 LOC101247961 LOC4343537 LOC100276080 LOC103873288 LOC100262150 LOC100246751 LOC7468604 LOC25492548 LOC123188339 LOC123052455 LOC123429889 LOC107906585 LOC107959151 LOC106347557 LOC106352756 LOC8084103 LOC102602447 LOC102616143 LOC100826421 LOC107764576 LOC107764222
Function* Pentatricopeptide repeat (PPR) superfamily protein protein THYLAKOID ASSEMBLY 8-like, chloroplastic pentatricopeptide repeat-containing protein protein THYLAKOID ASSEMBLY 8-like, chloroplastic protein THYLAKOID ASSEMBLY 8-like, chloroplastic uncharacterized LOC100276080 protein THYLAKOID ASSEMBLY 8-like, chloroplastic protein THYLAKOID ASSEMBLY 8-like, chloroplastic protein THYLAKOID ASSEMBLY 8-like, chloroplastic protein THYLAKOID ASSEMBLY 8-like, chloroplastic protein THYLAKOID ASSEMBLY 8-like, chloroplastic protein THYLAKOID ASSEMBLY 8-like, chloroplastic protein THYLAKOID ASSEMBLY 8-like, chloroplastic protein THYLAKOID ASSEMBLY 8-like, chloroplastic protein THYLAKOID ASSEMBLY 8-like, chloroplastic protein THYLAKOID ASSEMBLY 8-like, chloroplastic protein THYLAKOID ASSEMBLY 8-like, chloroplastic protein THYLAKOID ASSEMBLY 8-like, chloroplastic pentatricopeptide repeat-containing protein At3g46870 pentatricopeptide repeat-containing protein At3g46870 protein THYLAKOID ASSEMBLY 8-like, chloroplastic protein THYLAKOID ASSEMBLY 8-like, chloroplastic protein THYLAKOID ASSEMBLY 8-like, chloroplastic protein THYLAKOID ASSEMBLY 8-like, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03083 Polycomb repressive complex 2
sly03018 RNA degradation 2
sly00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi00561 Glycerolipid metabolism 2
ghi00566 Sulfoquinovose metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 823840 100798492 100306428 101247961 4343537 100276080 103873288 100262150 100246751 7468604 25492548 123188339 123052455 123429889 107906585 107959151 106347557 106352756 8084103 102602447 102616143 100826421 107764576 107764222
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