Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   RNEE/G   RNAse E/G-like protein 
 ath-r.7   RNEE/G   RNAse E/G-like protein 
 ath-m.9   RNEE/G   RNAse E/G-like protein 
 ath-e.2   RNEE/G   RNAse E/G-like protein 
 ath-m.4.bio   RNEE/G   RNAse E/G-like protein 
 ath-m.4.hor   RNEE/G   RNAse E/G-like protein 
 ath-m.4.lig   RNEE/G   RNAse E/G-like protein 
 ath-m.4.str   RNEE/G   RNAse E/G-like protein 
 ath-m.4.tis   RNEE/G   RNAse E/G-like protein 
 bra-r.6   103828537   ribonuclease E/G-like protein, chloroplastic 
 bna-r.1   106366665   ribonuclease E/G-like protein, chloroplastic 
 bna-r.1   106405683   ribonuclease E/G-like protein, chloroplastic 
 ghi-r.1   107924528   ribonuclease E/G-like protein, chloroplastic 
 ghi-r.1   107912469   ribonuclease E/G-like protein, chloroplastic 
 cit-r.1   102607608   ribonuclease E/G-like protein, chloroplastic 
 gma-u.5   100809907   ribonuclease E/G-like protein, chloroplastic 
 gma-u.5   100795436   ribonuclease E/G-like protein, chloroplastic 
 vvi-u.5   100256290   ribonuclease E/G-like protein, chloroplastic 
 ppo-u.5   7469343   ribonuclease E/G-like protein, chloroplastic 
 mtr-u.5   11409378   ribonuclease E/G-like protein, chloroplastic 
 sly-u.5   100136876   ribonuclease E 
 sot-r.1   102583907   ribonuclease E/G-like protein, chloroplastic 
 nta-r.1   107793058   ribonuclease E/G-like protein, chloroplastic 
 nta-r.1   107760436   ribonuclease E/G-like protein, chloroplastic 
 osa-u.5   4345271   ribonuclease E/G-like protein, chloroplastic 
 zma-u.5   103643177   ribonuclease E/G-like protein, chloroplastic 
 tae-r.2   123165327   ribonuclease E/G-like protein, chloroplastic 
 tae-r.2   123160510   ribonuclease E/G-like protein, chloroplastic 
 tae-r.2   123154389   ribonuclease E/G-like protein, chloroplastic 
 hvu-r.1   123413152   ribonuclease E/G-like protein, chloroplastic 
 sbi-r.1   8075550   ribonuclease E/G-like protein, chloroplastic 
 bdi-r.1   100832256   ribonuclease E/G-like protein, chloroplastic 

close


Top 50 coexpressed genes to RNEE/G (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to RNEE/G (ath-u.5 coexpression data)

CoexMap"814965"


athRNEE/G | Entrez gene ID : 814965      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010239 [list] [network] chloroplast mRNA processing  (12 genes)  IMP  
GO:1901259 [list] [network] chloroplast rRNA processing  (15 genes)  IMP  
GO:0009658 [list] [network] chloroplast organization  (197 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA IDA IMP  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0004521 [list] [network] RNA endonuclease activity  (82 genes)  IDA  
Protein NP_001189510.1 [sequence] [blastp]
NP_001318196.1 [sequence] [blastp]
NP_001325370.1 [sequence] [blastp]
NP_001325371.1 [sequence] [blastp]
NP_001325372.1 [sequence] [blastp]
NP_178508.2 [sequence] [blastp]
NP_850987.1 [sequence] [blastp]
NP_850988.1 [sequence] [blastp]
NP_850989.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_001189510.1)
nucl 5,  cyto 2,  chlo 1,  cyto_plas 1  (predict for NP_001318196.1)
nucl 5,  cyto 2,  chlo 1,  cyto_plas 1  (predict for NP_001325370.1)
nucl 4,  cyto 3,  chlo 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_001325371.1)
nucl 5,  chlo 2,  cyto 1,  cysk 1,  chlo_mito 1,  cysk_plas 1  (predict for NP_001325372.1)
nucl 5,  cyto 2,  chlo 1,  cyto_plas 1  (predict for NP_178508.2)
nucl 7,  cyto 2  (predict for NP_850987.1)
nucl 4,  cyto 3,  chlo 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_850988.1)
cyto 3,  nucl 2,  vacu 2,  golg 1,  nucl_plas 1,  E.R._vacu 1,  cyto_pero 1  (predict for NP_850989.1)
Subcellular
localization
TargetP
chlo 4,  mito 3  (predict for NP_001189510.1)
other 8  (predict for NP_001318196.1)
other 8  (predict for NP_001325370.1)
mito 7  (predict for NP_001325371.1)
other 7  (predict for NP_001325372.1)
other 8  (predict for NP_178508.2)
chlo 6,  mito 3  (predict for NP_850987.1)
mito 7  (predict for NP_850988.1)
other 8  (predict for NP_850989.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
RNEE/G
ath-r.7
for
RNEE/G
ath-m.9
for
RNEE/G
ath-e.2
for
RNEE/G
ath-m.4.bio
for
RNEE/G
ath-m.4.hor
for
RNEE/G
ath-m.4.lig
for
RNEE/G
ath-m.4.str
for
RNEE/G
ath-m.4.tis
for
RNEE/G
bra-r.6
for
103828537
bna-r.1
for
106366665
bna-r.1
for
106405683
ghi-r.1
for
107924528
ghi-r.1
for
107912469
cit-r.1
for
102607608
gma-u.5
for
100809907
gma-u.5
for
100795436
vvi-u.5
for
100256290
ppo-u.5
for
7469343
mtr-u.5
for
11409378
sly-u.5
for
100136876
sot-r.1
for
102583907
nta-r.1
for
107793058
nta-r.1
for
107760436
osa-u.5
for
4345271
zma-u.5
for
103643177
tae-r.2
for
123165327
tae-r.2
for
123160510
tae-r.2
for
123154389
hvu-r.1
for
123413152
sbi-r.1
for
8075550
bdi-r.1
for
100832256


Ortholog ID: 10644
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol RNEE/G LOC103828537 LOC106366665 LOC106405683 LOC107924528 LOC107912469 LOC102607608 LOC100809907 LOC100795436 LOC100256290 LOC7469343 LOC11409378 LOC100136876 LOC102583907 LOC107793058 LOC107760436 LOC4345271 LOC103643177 LOC123165327 LOC123160510 LOC123154389 LOC123413152 LOC8075550 LOC100832256
Function* RNAse E/G-like protein ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic ribonuclease E/G-like protein, chloroplastic
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
nta00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 6
sbi03010 Ribosome 5
sbi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 814965 103828537 106366665 106405683 107924528 107912469 102607608 100809907 100795436 100256290 7469343 11409378 100136876 102583907 107793058 107760436 4345271 103643177 123165327 123160510 123154389 123413152 8075550 100832256
The preparation time of this page was 1.3 [sec].