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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   RAD51B   DNA repair (Rad51) family protein 
 ath-m.4.bio   RAD51B   DNA repair (Rad51) family protein 
 ath-m.4.hor   RAD51B   DNA repair (Rad51) family protein 
 ath-m.4.lig   RAD51B   DNA repair (Rad51) family protein 
 ath-m.4.str   RAD51B   DNA repair (Rad51) family protein 
 ath-m.4.tis   RAD51B   DNA repair (Rad51) family protein 
 vvi-u.5   100250095   DNA repair protein RAD51 homolog 2 
 mtr-u.5   11419094   DNA repair protein RAD51 homolog 2 
 sly-u.5   101253055   DNA repair protein RAD51 homolog 2 
 osa-u.5   4337655   DNA repair protein RAD51 homolog 2 

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Top 50 coexpressed genes to RAD51B (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RAD51B (ath-m.9 coexpression data)

CoexMap"817404"


athRAD51B | Entrez gene ID : 817404      
Species ath vvi mtr sly osa tae hvu zma ghi bdi cit gma bra cre sbi ppo bna nta sot
Paralog 6 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03440 [list] [network] Homologous recombination (60 genes)
GO BP
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (43 genes)  IEA  
GO:0006281 [list] [network] DNA repair  (203 genes)  IMP  
GO CC
GO:0033063 [list] [network] Rad51B-Rad51C-Rad51D-XRCC2 complex  (2 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0000150 [list] [network] DNA strand exchange activity  (2 genes)  ISS  
GO:0140664 [list] [network] ATP-dependent DNA damage sensor activity  (9 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (205 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1274 genes)  IEA  
Protein NP_001031438.1 [sequence] [blastp]
NP_001118403.1 [sequence] [blastp]
NP_001154538.1 [sequence] [blastp]
NP_001323469.1 [sequence] [blastp]
NP_001323470.1 [sequence] [blastp]
NP_180423.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 2,  cyto 1,  mito 1,  pero 1,  cyto_pero 1  (predict for NP_001031438.1)
nucl 5,  cyto 2,  cysk 1,  chlo 1,  vacu 1,  cysk_plas 1  (predict for NP_001118403.1)
nucl 7,  cyto 2  (predict for NP_001154538.1)
chlo 6,  nucl 2,  cyto 1,  mito 1,  pero 1,  cyto_pero 1  (predict for NP_001323469.1)
chlo 6,  nucl 2,  cyto 1,  mito 1,  pero 1,  cyto_pero 1  (predict for NP_001323470.1)
chlo 6,  cyto 2,  nucl 1,  mito 1,  pero 1  (predict for NP_180423.3)
Subcellular
localization
TargetP
other 5  (predict for NP_001031438.1)
other 7  (predict for NP_001118403.1)
other 7  (predict for NP_001154538.1)
other 5  (predict for NP_001323469.1)
other 5  (predict for NP_001323470.1)
other 5  (predict for NP_180423.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
RAD51B

.
ath-m.4.bio
for
RAD51B

.
ath-m.4.hor
for
RAD51B

.
ath-m.4.lig
for
RAD51B

.
ath-m.4.str
for
RAD51B

.
ath-m.4.tis
for
RAD51B

.
vvi-u.5
for
100250095

.
mtr-u.5
for
11419094

.
sly-u.5
for
101253055

.
osa-u.5
for
4337655

.


Ortholog ID: 10681
Species sly osa bra vvi mtr hvu bna bna cre sbi sot bdi nta nta
Symbol LOC101253055 LOC4337655 LOC103864899 LOC100250095 LOC11419094 LOC123403919 LOC106412083 LOC106450023 CHLRE_01g025300v5 LOC8071245 LOC102578308 LOC100846195 LOC107791433 LOC107827628
Function* DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 uncharacterized protein DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2 DNA repair protein RAD51 homolog 2-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 10
mtr03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00340 Histidine metabolism 2
nta01230 Biosynthesis of amino acids 2
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03440 Homologous recombination 2
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00340 Histidine metabolism 2
nta01230 Biosynthesis of amino acids 2
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03440 Homologous recombination 2
nta00230 Purine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101253055 4337655 103864899 100250095 11419094 123403919 106412083 106450023 5715279 8071245 102578308 100846195 107791433 107827628
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