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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G14250   RING/U-box superfamily protein 
 ath-m.4.bio   AT3G14250   RING/U-box superfamily protein 
 ath-m.4.hor   AT3G14250   RING/U-box superfamily protein 
 ath-m.4.lig   AT3G14250   RING/U-box superfamily protein 
 ath-m.4.str   AT3G14250   RING/U-box superfamily protein 
 ath-m.4.tis   AT3G14250   RING/U-box superfamily protein 
 gma-u.5   100803898   probable E3 ubiquitin-protein ligase rbrA 
 vvi-u.5   100252570   E3 ubiquitin-protein ligase RSL1 
 vvi-u.5   100256964   E3 ubiquitin-protein ligase RSL1 
 ppo-u.5   18100148   E3 ubiquitin-protein ligase RSL1 
 ppo-u.5   18094363   E3 ubiquitin-protein ligase RSL1 
 sly-u.5   101243987   E3 ubiquitin-protein ligase RSL1-like 
 sly-u.5   101267277   E3 ubiquitin-protein ligase RSL1-like 
 osa-u.5   4346618   E3 ubiquitin-protein ligase RSL1 
 zma-u.5   100280727   ubiquitin-protein ligase/ zinc ion binding protein 
 zma-u.5   100381983   putative RING zinc finger domain superfamily protein 

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Top 50 coexpressed genes to AT3G14250 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G14250 (ath-m.9 coexpression data)

CoexMap"820645"


athAT3G14250 | Entrez gene ID : 820645      
Species ath gma vvi ppo sly osa zma bdi mtr bra hvu cit bna sbi ghi sot nta cre tae
Paralog 6 1 2 2 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein NP_188042.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  cyto 1,  pero 1,  cysk 1,  chlo_mito 1,  cyto_pero 1  (predict for NP_188042.2)
Subcellular
localization
TargetP
other 8  (predict for NP_188042.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G14250
ath-m.4.bio
for
AT3G14250
ath-m.4.hor
for
AT3G14250
ath-m.4.lig
for
AT3G14250
ath-m.4.str
for
AT3G14250
ath-m.4.tis
for
AT3G14250
gma-u.5
for
100803898
vvi-u.5
for
100252570
vvi-u.5
for
100256964
ppo-u.5
for
18100148
ppo-u.5
for
18094363
sly-u.5
for
101243987
sly-u.5
for
101267277
osa-u.5
for
4346618
zma-u.5
for
100280727
zma-u.5
for
100381983


Ortholog ID: 369
Species ghi ghi cit vvi ppo ppo mtr sly sly sot nta zma zma hvu sbi sbi bdi cre cre
Symbol LOC107907073 LOC107958821 LOC102618889 LOC100252570 LOC18094363 LOC7467917 LOC25486596 LOC101247495 LOC101249062 LOC102585890 LOC107792398 LOC100381983 LOC100194163 LOC123431232 LOC8062109 LOC8062110 LOC100827708 CHLRE_01g060712v5 CHLRE_03g150850v5
Function* ranBP-type and C3HC4-type zinc finger-containing protein 1 probable E3 ubiquitin-protein ligase RNF217 E3 ubiquitin-protein ligase RSL1-like E3 ubiquitin-protein ligase RSL1 E3 ubiquitin-protein ligase RSL1 uncharacterized LOC7467917 probable E3 ubiquitin-protein ligase RNF217 E3 ubiquitin-protein ligase RSL1 E3 ubiquitin-protein ligase RSL1-like probable E3 ubiquitin-protein ligase RNF217 E3 ubiquitin-protein ligase RSL1 putative RING zinc finger domain superfamily protein putative RING zinc finger domain superfamily protein uncharacterized LOC123431232 uncharacterized LOC8062109 probable E3 ubiquitin-protein ligase RNF144A-B uncharacterized protein DDB_G0292642 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 3
ppo03420 Nucleotide excision repair 3
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03013 Nucleocytoplasmic transport 4
mtr03020 RNA polymerase 2
mtr03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00230 Purine metabolism 2
cre03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107907073 107958821 102618889 100252570 18094363 7467917 25486596 101247495 101249062 102585890 107792398 100381983 100194163 123431232 8062109 8062110 100827708 5725742 5721143
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