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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G01210   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-r.7   AT3G01210   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.9   AT3G01210   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-e.2   AT3G01210   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.bio   AT3G01210   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.hor   AT3G01210   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.lig   AT3G01210   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.str   AT3G01210   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.tis   AT3G01210   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-u.5   AT1G14340   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.5   100784005   binding partner of ACD11 1 
 gma-u.5   100805907   binding partner of ACD11 1 
 gma-u.5   100797381   RNA recognition motif-containing protein 
 vvi-u.5   100257613   binding partner of ACD11 1 
 vvi-u.5   SUC12   sucrose transporter 
 ppo-u.5   7482466   binding partner of ACD11 1 
 mtr-u.5   11422399   binding partner of ACD11 1 
 mtr-u.5   11417543   binding partner of ACD11 1 
 sly-u.5   101266594   binding partner of ACD11 1 
 sly-u.5   101260815   binding partner of ACD11 1 
 osa-u.5   4337172   binding partner of ACD11 1 
 zma-u.5   100282237   uncharacterized LOC100282237 
 zma-u.5   100193735   uncharacterized LOC100193735 

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Top 50 coexpressed genes to AT3G01210 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G01210 (ath-u.5 coexpression data)

CoexMap"821275"


athAT3G01210 | Entrez gene ID : 821275      
Species ath gma vvi ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 10 3 2 1 2 2 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0050832 [list] [network] defense response to fungus  (282 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001327068.1 [sequence] [blastp]
NP_186770.3 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 2,  nucl 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for NP_001327068.1)
cyto 4,  chlo 2,  nucl 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for NP_186770.3)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for NP_001327068.1)
other 8,  mito 3  (predict for NP_186770.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G01210

.
ath-r.7
for
AT3G01210

.
ath-m.9
for
AT3G01210

.
ath-e.2
for
AT3G01210

.
ath-m.4.bio
for
AT3G01210

.
ath-m.4.hor
for
AT3G01210

.
ath-m.4.lig
for
AT3G01210

.
ath-m.4.str
for
AT3G01210

.
ath-m.4.tis
for
AT3G01210

.
ath-u.5
for
AT1G14340

.
gma-u.5
for
100784005

.
gma-u.5
for
100805907

.
gma-u.5
for
100797381

.
vvi-u.5
for
100257613

.
vvi-u.5
for
SUC12

.
ppo-u.5
for
7482466

.
mtr-u.5
for
11422399

.
mtr-u.5
for
11417543

.
sly-u.5
for
101266594

.
sly-u.5
for
101260815

.
osa-u.5
for
4337172

.
zma-u.5
for
100282237

.
zma-u.5
for
100193735

.


Ortholog ID: 4727
Species ath ath gma gma sly sly osa zma zma bra bra vvi vvi ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot sot cit cit bdi nta nta
Symbol AT3G01210 AT1G14340 LOC100805907 LOC100784005 LOC101260815 LOC101266594 LOC4337172 LOC100282237 LOC100193735 LOC103872127 LOC103836077 LOC100257613 SUC12 LOC7482466 LOC11422399 LOC11417543 LOC123047170 LOC123190828 LOC123428197 LOC107908465 LOC107888621 LOC106388655 LOC106400990 LOC8068465 LOC102605891 LOC102591864 LOC102607750 LOC102628066 LOC100821991 LOC107775927 LOC107774707
Function* RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 uncharacterized LOC100282237 uncharacterized LOC100193735 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 sucrose transporter binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1-like binding partner of ACD11 1 binding partner of ACD11 1-like protein vip1-like binding partner of ACD11 1-like binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1 binding partner of ACD11 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 5
ath00030 Pentose phosphate pathway 4
ath00480 Glutathione metabolism 4
ath04075 Plant hormone signal transduction 2
ath00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
gma04120 Ubiquitin mediated proteolysis 2
gma00270 Cysteine and methionine metabolism 2
gma03040 Spliceosome 2
gma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 4
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly04120 Ubiquitin mediated proteolysis 2
sly04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 2
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 3
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 4
ppo04145 Phagosome 2
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
ghi03272 Virion - Hepatitis viruses 2
ghi04144 Endocytosis 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
bna00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 2
bna00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03272 Virion - Hepatitis viruses 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
cit04141 Protein processing in endoplasmic reticulum 3
cit03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00062 Fatty acid elongation 3
bdi01040 Biosynthesis of unsaturated fatty acids 3
bdi01212 Fatty acid metabolism 3
bdi00561 Glycerolipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821275 837995 100805907 100784005 101260815 101266594 4337172 100282237 100193735 103872127 103836077 100257613 100251604 7482466 11422399 11417543 123047170 123190828 123428197 107908465 107888621 106388655 106400990 8068465 102605891 102591864 102607750 102628066 100821991 107775927 107774707
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