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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   UBP18   ubiquitin-specific protease 18 
 ath-r.7   UBP18   ubiquitin-specific protease 18 
 ath-m.9   UBP18   ubiquitin-specific protease 18 
 ath-e.2   UBP18   ubiquitin-specific protease 18 
 ath-m.4.bio   UBP18   ubiquitin-specific protease 18 
 ath-m.4.hor   UBP18   ubiquitin-specific protease 18 
 ath-m.4.lig   UBP18   ubiquitin-specific protease 18 
 ath-m.4.str   UBP18   ubiquitin-specific protease 18 
 ath-m.4.tis   UBP18   ubiquitin-specific protease 18 
 ath-u.5   UBP19   ubiquitin-specific protease 19 
 gma-u.5   100820594   ubiquitin carboxyl-terminal hydrolase 18 
 gma-u.5   100817913   ubiquitin carboxyl-terminal hydrolase 18 
 gma-u.5   100810577   ubiquitin carboxyl-terminal hydrolase 18 
 vvi-u.5   100246913   ubiquitin carboxyl-terminal hydrolase 18 
 ppo-u.5   7459906   ubiquitin carboxyl-terminal hydrolase 18 
 ppo-u.5   7458720   ubiquitin carboxyl-terminal hydrolase 18 
 mtr-u.5   25481970   ubiquitin carboxyl-terminal hydrolase 18 
 sly-u.5   101247350   ubiquitin carboxyl-terminal hydrolase 18 
 sly-u.5   101244268   ubiquitin carboxyl-terminal hydrolase 18 
 osa-u.5   4350688   ubiquitin carboxyl-terminal hydrolase 18 
 osa-u.5   4341708   ubiquitin carboxyl-terminal hydrolase 15 
 zma-u.5   103629692   ubiquitin carboxyl-terminal hydrolase 18 

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Top 50 coexpressed genes to UBP18 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to UBP18 (ath-u.5 coexpression data)

CoexMap"829295"


athUBP18 | Entrez gene ID : 829295      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 10 3 1 2 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_194895.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 3,  chlo 1,  nucl 1,  cyto 1,  vacu 1,  cyto_nucl 1  (predict for NP_194895.1)
Subcellular
localization
TargetP
scret 9,  other 4  (predict for NP_194895.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
UBP18
ath-r.7
for
UBP18
ath-m.9
for
UBP18
ath-e.2
for
UBP18
ath-m.4.bio
for
UBP18
ath-m.4.hor
for
UBP18
ath-m.4.lig
for
UBP18
ath-m.4.str
for
UBP18
ath-m.4.tis
for
UBP18
ath-u.5
for
UBP19
gma-u.5
for
100820594
gma-u.5
for
100817913
gma-u.5
for
100810577
vvi-u.5
for
100246913
ppo-u.5
for
7459906
ppo-u.5
for
7458720
mtr-u.5
for
25481970
sly-u.5
for
101247350
sly-u.5
for
101244268
osa-u.5
for
4350688
osa-u.5
for
4341708
zma-u.5
for
103629692


Ortholog ID: 4870
Species ath ath bra bra bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sly sot sot nta nta osa osa zma tae tae hvu sbi bdi
Symbol UBP19 UBP18 LOC103851629 LOC103842238 LOC106354736 LOC106446660 LOC107953715 LOC107939429 LOC102607963 LOC100810577 LOC100820594 LOC100246913 LOC7459906 LOC7458720 LOC25481970 LOC101244268 LOC101247350 LOC102605211 LOC102580922 LOC107790130 LOC107831642 LOC4341708 LOC4350688 LOC103629692 LOC123149400 LOC123155834 LOC123407131 LOC8069359 LOC100846465
Function* ubiquitin-specific protease 19 ubiquitin-specific protease 18 ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 19 ubiquitin carboxyl-terminal hydrolase 18-like ubiquitin carboxyl-terminal hydrolase 19 ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 19 ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 18-like ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 18-like ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 15 ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 42 ubiquitin carboxyl-terminal hydrolase 19 ubiquitin carboxyl-terminal hydrolase 42-like ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 19
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 4
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna02010 ABC transporters 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 2
ghi00561 Glycerolipid metabolism 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi01200 Carbon metabolism 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 2
ghi00561 Glycerolipid metabolism 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi01200 Carbon metabolism 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04148 Efferocytosis 2
cit03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 6
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 8
sot03040 Spliceosome 3
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta03460 Fanconi anemia pathway 2
nta00561 Glycerolipid metabolism 2
nta00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 2
bdi04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817000 829295 103851629 103842238 106354736 106446660 107953715 107939429 102607963 100810577 100820594 100246913 7459906 7458720 25481970 101244268 101247350 102605211 102580922 107790130 107831642 4341708 4350688 103629692 123149400 123155834 123407131 8069359 100846465
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