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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   MLH3   MUTL protein homolog 3 
 ath-m.4.bio   MLH3   MUTL protein homolog 3 
 ath-m.4.hor   MLH3   MUTL protein homolog 3 
 ath-m.4.lig   MLH3   MUTL protein homolog 3 
 ath-m.4.str   MLH3   MUTL protein homolog 3 
 ath-m.4.tis   MLH3   MUTL protein homolog 3 
 bra-r.6   103862416   DNA mismatch repair protein MLH3 
 bna-r.1   106348139   DNA mismatch repair protein MLH3 
 bna-r.1   111214361   DNA mismatch repair protein MLH3 
 ghi-r.1   107939586   DNA mismatch repair protein MLH3 
 ghi-r.1   107937809   DNA mismatch repair protein MLH3 
 cit-r.1   102608669   DNA mismatch repair protein MLH3 
 gma-u.5   100780255   DNA mismatch repair protein MLH3 
 gma-u.5   100788019   DNA mismatch repair protein MLH3 
 vvi-u.5   100253902   DNA mismatch repair protein MLH3 
 ppo-u.5   7492129   DNA mismatch repair protein MLH3 
 mtr-u.5   11424785   DNA mismatch repair protein MLH3 
 sly-u.5   101258812   DNA mismatch repair protein MLH3 
 sot-r.1   102597195   DNA mismatch repair protein MutL-like 
 sot-r.1   102587970   uncharacterized LOC102587970 
 sot-r.1   102597269   DNA mismatch repair protein MLH3 
 nta-r.1   107814329   DNA mismatch repair protein MLH3 
 nta-r.1   107779080   DNA mismatch repair protein MLH3-like 
 osa-u.5   4347791   DNA mismatch repair protein MLH3 
 zma-u.5   109944384   uncharacterized LOC109944384 
 zma-u.5   109944383   uncharacterized LOC109944383 
 zma-u.5   103647640   DNA mismatch repair protein MLH3 
 tae-r.2   123113022   DNA mismatch repair protein MLH3 
 tae-r.2   123122538   DNA mismatch repair protein MLH3 
 tae-r.2   123104740   DNA mismatch repair protein MLH3 
 hvu-r.1   123451897   DNA mismatch repair protein MLH3 
 sbi-r.1   8077226   DNA mismatch repair protein MLH3 
 bdi-r.1   100827102   DNA mismatch repair protein MLH3 
 cre-r.1   CHLRE_07g336650v5   uncharacterized protein 

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Top 50 coexpressed genes to MLH3 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to MLH3 (ath-m.9 coexpression data)

CoexMap"829704"


athMLH3 | Entrez gene ID : 829704      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 6 1 2 2 1 2 1 1 1 1 3 2 1 3 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03430 [list] [network] Mismatch repair (32 genes)
GO BP
GO:0007131 [list] [network] reciprocal meiotic recombination  (44 genes)  IMP  
GO CC
GO:0005694 [list] [network] chromosome  (230 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001320143.1 [sequence] [blastp]
NP_001328251.1 [sequence] [blastp]
NP_001328252.1 [sequence] [blastp]
NP_001328253.1 [sequence] [blastp]
NP_001328254.1 [sequence] [blastp]
NP_001328255.1 [sequence] [blastp]
NP_001328256.1 [sequence] [blastp]
NP_195277.6 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  chlo 1,  cysk 1  (predict for NP_001320143.1)
nucl 5,  plas 2,  chlo 1,  E.R._plas 1,  cyto_plas 1  (predict for NP_001328251.1)
nucl 7,  cysk 1,  chlo 1,  cyto 1,  cysk_plas 1  (predict for NP_001328252.1)
nucl 7,  chlo 1,  cysk 1  (predict for NP_001328253.1)
nucl 7,  chlo 1,  cysk 1  (predict for NP_001328254.1)
nucl 7,  cysk 1,  mito 1,  golg_plas 1  (predict for NP_001328255.1)
nucl 8,  cysk 1  (predict for NP_001328256.1)
nucl 4,  chlo 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_195277.6)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for NP_001320143.1)
other 6,  mito 3  (predict for NP_001328251.1)
other 6,  mito 3  (predict for NP_001328252.1)
other 6,  mito 3  (predict for NP_001328253.1)
other 6,  mito 3  (predict for NP_001328254.1)
other 6  (predict for NP_001328255.1)
other 6,  mito 3  (predict for NP_001328256.1)
other 6  (predict for NP_195277.6)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
MLH3
ath-m.4.bio
for
MLH3
ath-m.4.hor
for
MLH3
ath-m.4.lig
for
MLH3
ath-m.4.str
for
MLH3
ath-m.4.tis
for
MLH3
bra-r.6
for
103862416
bna-r.1
for
106348139
bna-r.1
for
111214361
ghi-r.1
for
107939586
ghi-r.1
for
107937809
cit-r.1
for
102608669
gma-u.5
for
100780255
gma-u.5
for
100788019
vvi-u.5
for
100253902
ppo-u.5
for
7492129
mtr-u.5
for
11424785
sly-u.5
for
101258812
sot-r.1
for
102597195
sot-r.1
for
102587970
sot-r.1
for
102597269
nta-r.1
for
107814329
nta-r.1
for
107779080
osa-u.5
for
4347791
zma-u.5
for
109944384
zma-u.5
for
109944383
zma-u.5
for
103647640
tae-r.2
for
123113022
tae-r.2
for
123122538
tae-r.2
for
123104740
hvu-r.1
for
123451897
sbi-r.1
for
8077226
bdi-r.1
for
100827102
cre-r.1
for
CHLRE_07g336650v5


Ortholog ID: 7309
Species bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot sot sot nta nta osa zma zma zma tae tae tae hvu sbi bdi cre
Symbol LOC103862416 LOC106348139 LOC111214361 LOC107939586 LOC107937809 LOC102608669 LOC100780255 LOC100788019 LOC100253902 LOC7492129 LOC11424785 LOC101258812 LOC102597195 LOC102587970 LOC102582017 LOC107814329 LOC107779080 LOC4347791 LOC109944384 LOC109944383 LOC103647640 LOC123113022 LOC123122538 LOC123104740 LOC123451897 LOC8077226 LOC100827102 CHLRE_07g336650v5
Function* DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MutL-like uncharacterized LOC102587970 DNA mismatch repair protein MLH3-like DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3-like DNA mismatch repair protein MLH3 uncharacterized LOC109944384 uncharacterized LOC109944383 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra03460 Fanconi anemia pathway 2
bra03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 7
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 7
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03430 Mismatch repair 2
ghi03460 Fanconi anemia pathway 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03430 Mismatch repair 2
ghi03460 Fanconi anemia pathway 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00250 Alanine, aspartate and glutamate metabolism 2
gma00260 Glycine, serine and threonine metabolism 2
gma00270 Cysteine and methionine metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04148 Efferocytosis 2
ppo03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 4
nta03460 Fanconi anemia pathway 3
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 7
tae03430 Mismatch repair 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03430 Mismatch repair 3
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
tae03022 Basal transcription factors 3
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
bdi03020 RNA polymerase 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103862416 106348139 111214361 107939586 107937809 102608669 100780255 100788019 100253902 7492129 11424785 101258812 102597195 102587970 102582017 107814329 107779080 4347791 109944384 109944383 103647640 123113022 123122538 123104740 123451897 8077226 100827102 5725625
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