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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G17410   Spc97 / Spc98 family of spindle pole body (SBP) component 
 ath-r.7   AT5G17410   Spc97 / Spc98 family of spindle pole body (SBP) component 
 ath-m.9   AT5G17410   Spc97 / Spc98 family of spindle pole body (SBP) component 
 ath-e.2   AT5G17410   Spc97 / Spc98 family of spindle pole body (SBP) component 
 ath-m.4.bio   AT5G17410   Spc97 / Spc98 family of spindle pole body (SBP) component 
 ath-m.4.hor   AT5G17410   Spc97 / Spc98 family of spindle pole body (SBP) component 
 ath-m.4.lig   AT5G17410   Spc97 / Spc98 family of spindle pole body (SBP) component 
 ath-m.4.str   AT5G17410   Spc97 / Spc98 family of spindle pole body (SBP) component 
 ath-m.4.tis   AT5G17410   Spc97 / Spc98 family of spindle pole body (SBP) component 
 bra-r.6   103856248   gamma-tubulin complex component 2 
 bna-r.1   106386337   gamma-tubulin complex component 2 
 bna-r.1   125595081   gamma-tubulin complex component 2-like 
 ghi-r.1   107922291   gamma-tubulin complex component 2 
 ghi-r.1   107917978   gamma-tubulin complex component 2 
 cit-r.1   102625766   gamma-tubulin complex component 2 
 gma-u.5   100791588   gamma-tubulin complex component 2 
 gma-u.5   100795585   gamma-tubulin complex component 2 
 vvi-u.5   100259303   gamma-tubulin complex component 2 
 ppo-u.5   7464601   gamma-tubulin complex component 2 
 mtr-u.5   11420686   gamma-tubulin complex component 2 
 sly-u.5   101262474   gamma-tubulin complex component 2 
 sot-r.1   102593245   gamma-tubulin complex component 2 
 nta-r.1   107774168   gamma-tubulin complex component 2-like 
 nta-r.1   107810950   gamma-tubulin complex component 2 
 nta-r.1   107814503   gamma-tubulin complex component 2-like 
 osa-u.5   4336312   gamma-tubulin complex component 2 
 zma-u.5   100274060   uncharacterized LOC100274060 
 tae-r.2   123189679   gamma-tubulin complex component 2 
 tae-r.2   123045942   gamma-tubulin complex component 2 
 hvu-r.1   123428620   gamma-tubulin complex component 2 
 sbi-r.1   8060214   gamma-tubulin complex component 2 
 bdi-r.1   100824480   gamma-tubulin complex component 2 
 cre-r.1   CHLRE_12g525500v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G17410 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G17410 (ath-u.5 coexpression data)

CoexMap"831607"


athAT5G17410 | Entrez gene ID : 831607      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 1 1 1 1 3 1 1 2 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0090063 [list] [network] positive regulation of microtubule nucleation  (2 genes)  IDA  
GO:0033566 [list] [network] gamma-tubulin complex localization  (3 genes)  IMP  
GO:0048229 [list] [network] gametophyte development  (505 genes)  IMP  
GO CC
GO:0000930 [list] [network] gamma-tubulin complex  (3 genes)  IDA  
GO:0055028 [list] [network] cortical microtubule  (50 genes)  IDA  
GO:0005938 [list] [network] cell cortex  (80 genes)  IDA  
GO:0005635 [list] [network] nuclear envelope  (107 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_568346.1 [sequence] [blastp]
NP_850838.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  mito 1,  plas 1,  cysk 1,  cysk_plas 1,  mito_plas 1  (predict for NP_568346.1)
nucl 7,  chlo 1,  mito 1,  plas 1,  cysk 1,  chlo_mito 1,  cysk_plas 1,  mito_plas 1  (predict for NP_850838.1)
Subcellular
localization
TargetP
other 4,  chlo 3  (predict for NP_568346.1)
chlo 4,  other 3  (predict for NP_850838.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G17410
ath-r.7
for
AT5G17410
ath-m.9
for
AT5G17410
ath-e.2
for
AT5G17410
ath-m.4.bio
for
AT5G17410
ath-m.4.hor
for
AT5G17410
ath-m.4.lig
for
AT5G17410
ath-m.4.str
for
AT5G17410
ath-m.4.tis
for
AT5G17410
bra-r.6
for
103856248
bna-r.1
for
106386337
bna-r.1
for
125595081
ghi-r.1
for
107922291
ghi-r.1
for
107917978
cit-r.1
for
102625766
gma-u.5
for
100791588
gma-u.5
for
100795585
vvi-u.5
for
100259303
ppo-u.5
for
7464601
mtr-u.5
for
11420686
sly-u.5
for
101262474
sot-r.1
for
102593245
nta-r.1
for
107774168
nta-r.1
for
107810950
nta-r.1
for
107814503
osa-u.5
for
4336312
zma-u.5
for
100274060
tae-r.2
for
123189679
tae-r.2
for
123045942
hvu-r.1
for
123428620
sbi-r.1
for
8060214
bdi-r.1
for
100824480
cre-r.1
for
CHLRE_12g525500v5


Ortholog ID: 9673
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta nta osa zma tae tae hvu sbi bdi cre
Symbol AT5G17410 LOC103856248 LOC106386337 LOC125595081 LOC107922291 LOC107917978 LOC102625766 LOC100791588 LOC100795585 LOC100259303 LOC7464601 LOC11420686 LOC101262474 LOC102593245 LOC107774168 LOC107810950 LOC107814503 LOC4336312 LOC100274060 LOC123189679 LOC123045942 LOC123428620 LOC8060214 LOC100824480 CHLRE_12g525500v5
Function* Spc97 / Spc98 family of spindle pole body (SBP) component gamma-tubulin complex component 2 gamma-tubulin complex component 2 gamma-tubulin complex component 2-like gamma-tubulin complex component 2 gamma-tubulin complex component 2 gamma-tubulin complex component 2 gamma-tubulin complex component 2 gamma-tubulin complex component 2 gamma-tubulin complex component 2 gamma-tubulin complex component 2 gamma-tubulin complex component 2 gamma-tubulin complex component 2 gamma-tubulin complex component 2 gamma-tubulin complex component 2-like gamma-tubulin complex component 2 gamma-tubulin complex component 2-like gamma-tubulin complex component 2 uncharacterized LOC100274060 gamma-tubulin complex component 2 gamma-tubulin complex component 2 gamma-tubulin complex component 2 gamma-tubulin complex component 2 gamma-tubulin complex component 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 4
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 4
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 2
osa03410 Base excision repair 2
osa03082 ATP-dependent chromatin remodeling 2
osa03015 mRNA surveillance pathway 2
osa03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00510 N-Glycan biosynthesis 2
zma00513 Various types of N-glycan biosynthesis 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae04142 Lysosome 2
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04081 Hormone signaling 2
tae04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 4
hvu04144 Endocytosis 3
hvu04145 Phagosome 2
hvu04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 4
cre03410 Base excision repair 2
cre03420 Nucleotide excision repair 2
cre03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831607 103856248 106386337 125595081 107922291 107917978 102625766 100791588 100795585 100259303 7464601 11420686 101262474 102593245 107774168 107810950 107814503 4336312 100274060 123189679 123045942 123428620 8060214 100824480 5722501
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