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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G02830   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-r.7   AT5G02830   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.9   AT5G02830   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-e.2   AT5G02830   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.bio   AT5G02830   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.hor   AT5G02830   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.lig   AT5G02830   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.str   AT5G02830   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.tis   AT5G02830   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100805564   pentatricopeptide repeat-containing protein At5g02830, chloroplastic 
 gma-u.5   100794606   pentatricopeptide repeat-containing protein At5g02830, chloroplastic 
 vvi-u.5   100260184   pentatricopeptide repeat-containing protein At5g02830, chloroplastic 
 ppo-u.5   18100244   pentatricopeptide repeat-containing protein At5g02830, chloroplastic 
 mtr-u.5   11430650   pentatricopeptide repeat-containing protein At5g02830, chloroplastic 
 sly-u.5   101261059   pentatricopeptide repeat-containing protein At5g02830, chloroplastic 
 osa-u.5   4332471   pentatricopeptide repeat-containing protein At5g02830, chloroplastic 
 zma-u.5   103639281   pentatricopeptide repeat-containing protein, chloroplastic-like 

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Top 50 coexpressed genes to AT5G02830 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G02830 (ath-u.5 coexpression data)

CoexMap"831772"


athAT5G02830 | Entrez gene ID : 831772      
Species ath gma vvi ppo mtr sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 9 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
Protein NP_195903.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  chlo_mito 4,  nucl 1,  cyto 1,  extr 1,  cyto_nucl 1  (predict for NP_195903.2)
Subcellular
localization
TargetP
chlo 8  (predict for NP_195903.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G02830

.
ath-r.7
for
AT5G02830

.
ath-m.9
for
AT5G02830

.
ath-e.2
for
AT5G02830

.
ath-m.4.bio
for
AT5G02830

.
ath-m.4.hor
for
AT5G02830

.
ath-m.4.lig
for
AT5G02830

.
ath-m.4.str
for
AT5G02830

.
ath-m.4.tis
for
AT5G02830

.
gma-u.5
for
100805564

.
gma-u.5
for
100794606

.
vvi-u.5
for
100260184

.
ppo-u.5
for
18100244

.
mtr-u.5
for
11430650

.
sly-u.5
for
101261059

.
osa-u.5
for
4332471

.
zma-u.5
for
103639281

.


Ortholog ID: 10308
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT5G02830 LOC100805564 LOC100794606 LOC101261059 LOC4332471 LOC103639281 LOC103847423 LOC100260184 LOC18100244 LOC11430650 LOC123092504 LOC123097818 LOC123448949 LOC107948338 LOC107897996 LOC106450518 LOC125579111 LOC8081449 LOC102578424 LOC102617778 LOC100838824 LOC107786354 LOC107791524
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein, chloroplastic-like pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic-like pentatricopeptide repeat-containing protein At5g02830, chloroplastic-like pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 3
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 6
ppo00710 Carbon fixation by Calvin cycle 4
ppo01230 Biosynthesis of amino acids 3
ppo00630 Glyoxylate and dicarboxylate metabolism 3
ppo00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00730 Thiamine metabolism 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00620 Pyruvate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831772 100805564 100794606 101261059 4332471 103639281 103847423 100260184 18100244 11430650 123092504 123097818 123448949 107948338 107897996 106450518 125579111 8081449 102578424 102617778 100838824 107786354 107791524
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