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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   RGLG3   Copine (Calcium-dependent phospholipid-binding protein) family 
 ath-r.7   RGLG3   Copine (Calcium-dependent phospholipid-binding protein) family 
 ath-m.9   RGLG3   Copine (Calcium-dependent phospholipid-binding protein) family 
 ath-e.2   RGLG3   Copine (Calcium-dependent phospholipid-binding protein) family 
 ath-m.4.bio   RGLG3   Copine (Calcium-dependent phospholipid-binding protein) family 
 ath-m.4.hor   RGLG3   Copine (Calcium-dependent phospholipid-binding protein) family 
 ath-m.4.lig   RGLG3   Copine (Calcium-dependent phospholipid-binding protein) family 
 ath-m.4.str   RGLG3   Copine (Calcium-dependent phospholipid-binding protein) family 
 ath-m.4.tis   RGLG3   Copine (Calcium-dependent phospholipid-binding protein) family 
 bra-r.6   103873813   E3 ubiquitin-protein ligase RGLG3 
 bra-r.6   103855220   E3 ubiquitin-protein ligase RGLG3 
 bna-r.1   125574928   E3 ubiquitin-protein ligase RGLG3-like 
 bna-r.1   106347950   E3 ubiquitin-protein ligase RGLG3 
 bna-r.1   125604753   E3 ubiquitin-protein ligase RGLG3-like 
 ghi-r.1   107948369   E3 ubiquitin-protein ligase RGLG3 
 ghi-r.1   107945398   E3 ubiquitin-protein ligase RGLG3 
 cit-r.1   102611908   E3 ubiquitin-protein ligase RGLG3 
 gma-u.5   100813310   E3 ubiquitin-protein ligase RGLG3 
 gma-u.5   100776002   E3 ubiquitin-protein ligase RGLG3 
 gma-u.5   100791316   E3 ubiquitin-protein ligase RGLG3 
 vvi-u.5   100249896   E3 ubiquitin-protein ligase RGLG3 
 ppo-u.5   7466857   E3 ubiquitin-protein ligase RGLG3 
 ppo-u.5   7490167   E3 ubiquitin-protein ligase RGLG3 
 mtr-u.5   11418943   E3 ubiquitin-protein ligase RGLG3 
 sly-u.5   101245289   E3 ubiquitin-protein ligase RGLG3 
 sot-r.1   102579642   E3 ubiquitin-protein ligase RGLG1 
 nta-r.1   107806658   E3 ubiquitin-protein ligase RGLG3 
 nta-r.1   107783976   E3 ubiquitin-protein ligase RGLG3 
 osa-u.5   4325244   E3 ubiquitin-protein ligase RGLG3 
 zma-u.5   100501644   Copine (Calcium-dependent phospholipid-binding protein) family 
 tae-r.2   123080813   E3 ubiquitin-protein ligase RGLG3 
 tae-r.2   123072628   E3 ubiquitin-protein ligase RGLG3 
 tae-r.2   123063526   E3 ubiquitin-protein ligase RGLG3 
 hvu-r.1   123445587   E3 ubiquitin-protein ligase RGLG3 
 sbi-r.1   110434115   E3 ubiquitin-protein ligase RGLG3 
 bdi-r.1   100821907   E3 ubiquitin-protein ligase RGLG3 

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Top 50 coexpressed genes to RGLG3 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RGLG3 (ath-u.5 coexpression data)

CoexMap"836518"


athRGLG3 | Entrez gene ID : 836518      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 1 3 1 2 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009867 [list] [network] jasmonic acid mediated signaling pathway  (74 genes)  IMP  
GO:0009611 [list] [network] response to wounding  (271 genes)  IMP  
GO:0042742 [list] [network] defense response to bacterium  (363 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (268 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001032132.1 [sequence] [blastp]
NP_201202.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 2,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_001032132.1)
cyto 5,  nucl 2,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_201202.2)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for NP_001032132.1)
other 4,  mito 3  (predict for NP_201202.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
RGLG3
ath-r.7
for
RGLG3
ath-m.9
for
RGLG3
ath-e.2
for
RGLG3
ath-m.4.bio
for
RGLG3
ath-m.4.hor
for
RGLG3
ath-m.4.lig
for
RGLG3
ath-m.4.str
for
RGLG3
ath-m.4.tis
for
RGLG3
bra-r.6
for
103873813
bra-r.6
for
103855220
bna-r.1
for
125574928
bna-r.1
for
106347950
bna-r.1
for
125604753
ghi-r.1
for
107948369
ghi-r.1
for
107945398
cit-r.1
for
102611908
gma-u.5
for
100813310
gma-u.5
for
100776002
gma-u.5
for
100791316
vvi-u.5
for
100249896
ppo-u.5
for
7466857
ppo-u.5
for
7490167
mtr-u.5
for
11418943
sly-u.5
for
101245289
sot-r.1
for
102579642
nta-r.1
for
107806658
nta-r.1
for
107783976
osa-u.5
for
4325244
zma-u.5
for
100501644
tae-r.2
for
123080813
tae-r.2
for
123072628
tae-r.2
for
123063526
hvu-r.1
for
123445587
sbi-r.1
for
110434115
bdi-r.1
for
100821907


Ortholog ID: 7774
Species ath bra bra bna bna bna ghi ghi cit gma gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol RGLG3 LOC103873813 LOC103855220 LOC125574928 LOC106347950 LOC125604753 LOC107948369 LOC107945398 LOC102611908 LOC100813310 LOC100776002 LOC100791316 LOC100249896 LOC7466857 LOC7490167 LOC11418943 LOC101245289 LOC102579642 LOC107806658 LOC107783976 LOC4325244 LOC100501644 LOC123080813 LOC123072628 LOC123063526 LOC123445587 LOC110434115 LOC100821907
Function* Copine (Calcium-dependent phospholipid-binding protein) family E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3-like E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3-like E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG1 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 Copine (Calcium-dependent phospholipid-binding protein) family E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00750 Vitamin B6 metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 4
vvi04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 3
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00040 Pentose and glucuronate interconversions 2
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00030 Pentose phosphate pathway 2
sly01200 Carbon metabolism 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
zma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 3
tae00270 Cysteine and methionine metabolism 3
tae00566 Sulfoquinovose metabolism 3
tae00620 Pyruvate metabolism 3
tae00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836518 103873813 103855220 125574928 106347950 125604753 107948369 107945398 102611908 100813310 100776002 100791316 100249896 7466857 7490167 11418943 101245289 102579642 107806658 107783976 4325244 100501644 123080813 123072628 123063526 123445587 110434115 100821907
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