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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   RPS15   cytosolic ribosomal protein S15 
 ath-r.7   RPS15   cytosolic ribosomal protein S15 
 ath-m.9   RPS15   cytosolic ribosomal protein S15 
 ath-e.2   RPS15   cytosolic ribosomal protein S15 
 ath-m.4.bio   RPS15   cytosolic ribosomal protein S15 
 ath-m.4.hor   RPS15   cytosolic ribosomal protein S15 
 ath-m.4.lig   RPS15   cytosolic ribosomal protein S15 
 ath-m.4.str   RPS15   cytosolic ribosomal protein S15 
 ath-m.4.tis   RPS15   cytosolic ribosomal protein S15 
 ath-u.5   AT5G09500   Ribosomal protein S19 family protein 
 ath-u.5   AT5G09510   Ribosomal protein S19 family protein 
 gma-u.5   100499781   uncharacterized LOC100499781 
 gma-u.5   100499657   40S ribosomal protein S15 
 gma-u.5   100801408   40S ribosomal protein S15-4 
 vvi-u.5   100263010   small ribosomal subunit protein uS19 
 vvi-u.5   100256302   small ribosomal subunit protein uS19 
 ppo-u.5   7498033   40S ribosomal protein S15-4 
 ppo-u.5   7454330   40S ribosomal protein S15-4 
 ppo-u.5   7471994   40S ribosomal protein S15 
 mtr-u.5   25484337   40S ribosomal protein S15-4 
 mtr-u.5   11439204   40S ribosomal protein S15-4 
 mtr-u.5   11411156   40S ribosomal protein S15-4 
 sly-u.5   101244902   small ribosomal subunit protein uS19 
 sly-u.5   101249784   small ribosomal subunit protein uS19 
 sly-u.5   101254699   small ribosomal subunit protein uS19 
 osa-u.5   4334438   small ribosomal subunit protein uS19-like 
 osa-u.5   4342580   40S ribosomal protein S15-like 
 zma-u.5   103648250   40S ribosomal protein S15 
 zma-u.5   100281004   40S ribosomal protein S15 
 zma-u.5   100282387   40S ribosomal protein S15 

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Top 50 coexpressed genes to RPS15 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RPS15 (ath-u.5 coexpression data)

CoexMap"839564"


athRPS15 | Entrez gene ID : 839564      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 11 3 2 3 3 3 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03010 [list] [network] Ribosome (394 genes)
GO BP
GO:0006412 [list] [network] translation  (926 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (93 genes)  HDA  
GO:0022626 [list] [network] cytosolic ribosome  (295 genes)  HDA  
GO:0000325 [list] [network] plant-type vacuole  (788 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (874 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1198 genes)  RCA  
GO:0005576 [list] [network] extracellular region  (3158 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
Protein NP_001030956.1 [sequence] [blastp]
NP_171923.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  nucl 1,  mito 1  (predict for NP_001030956.1)
cyto 9,  nucl 1,  mito 1  (predict for NP_171923.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001030956.1)
other 8  (predict for NP_171923.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
RPS15
ath-r.7
for
RPS15
ath-m.9
for
RPS15
ath-e.2
for
RPS15
ath-m.4.bio
for
RPS15
ath-m.4.hor
for
RPS15
ath-m.4.lig
for
RPS15
ath-m.4.str
for
RPS15
ath-m.4.tis
for
RPS15
ath-u.5
for
AT5G09500
ath-u.5
for
AT5G09510
gma-u.5
for
100499781
gma-u.5
for
100499657
gma-u.5
for
100801408
vvi-u.5
for
100263010
vvi-u.5
for
100256302
ppo-u.5
for
7498033
ppo-u.5
for
7454330
ppo-u.5
for
7471994
mtr-u.5
for
25484337
mtr-u.5
for
11439204
mtr-u.5
for
11411156
sly-u.5
for
101244902
sly-u.5
for
101249784
sly-u.5
for
101254699
osa-u.5
for
4334438
osa-u.5
for
4342580
zma-u.5
for
103648250
zma-u.5
for
100281004
zma-u.5
for
100282387


Ortholog ID: 1436
Species bra bra bna bna ghi ghi cit cit gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi cre
Symbol LOC103843661 LOC103850375 LOC106384933 LOC111205445 LOC107955458 LOC107928592 LOC102617909 LOC102626701 LOC100499781 LOC100801408 LOC100256302 LOC100263010 LOC7498033 LOC7471994 LOC25484337 LOC11439204 LOC101254699 LOC101244902 LOC102590786 LOC102590282 LOC107800576 LOC107785533 LOC4342580 LOC4334438 LOC100282387 LOC100216869 LOC123044867 LOC123123231 LOC123452740 LOC123426180 LOC8060758 LOC8081246 LOC100836895 CHLRE_08g360900v5
Function* 40S ribosomal protein S15-1 40S ribosomal protein S15-4 40S ribosomal protein S15-4 40S ribosomal protein S15-1 40S ribosomal protein S15-4 40S ribosomal protein S15-4 40S ribosomal protein S15-4 40S ribosomal protein S15-4 uncharacterized LOC100499781 40S ribosomal protein S15-4 small ribosomal subunit protein uS19 small ribosomal subunit protein uS19 40S ribosomal protein S15-4 40S ribosomal protein S15 40S ribosomal protein S15-4 40S ribosomal protein S15-4 small ribosomal subunit protein uS19 small ribosomal subunit protein uS19 40S ribosomal protein S15-like 40S ribosomal protein S15-like small ribosomal subunit protein uS19 small ribosomal subunit protein uS19 40S ribosomal protein S15-like small ribosomal subunit protein uS19-like 40S ribosomal protein S15 40S ribosomal protein S15-4 40S ribosomal protein S15 40S ribosomal protein S15 40S ribosomal protein S15-like 40S ribosomal protein S15 40S ribosomal protein S15 40S ribosomal protein S15 40S ribosomal protein S15 ribosomal protein S15
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 3
bra00941 Flavonoid biosynthesis 2
bra00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
ghi00230 Purine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 21
gma04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 18
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 14
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 17
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103843661 103850375 106384933 111205445 107955458 107928592 102617909 102626701 100499781 100801408 100256302 100263010 7498033 7471994 25484337 11439204 101254699 101244902 102590786 102590282 107800576 107785533 4342580 4334438 100282387 100216869 123044867 123123231 123452740 123426180 8060758 8081246 100836895 5721581
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