ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	ELF7	hydroxyproline-rich glycoprotein family protein
ath-r.7	ELF7	hydroxyproline-rich glycoprotein family protein
ath-m.9	ELF7	hydroxyproline-rich glycoprotein family protein
ath-e.2	ELF7	hydroxyproline-rich glycoprotein family protein
ath-m.4.bio	ELF7	hydroxyproline-rich glycoprotein family protein
ath-m.4.hor	ELF7	hydroxyproline-rich glycoprotein family protein
ath-m.4.lig	ELF7	hydroxyproline-rich glycoprotein family protein
ath-m.4.str	ELF7	hydroxyproline-rich glycoprotein family protein
ath-m.4.tis	ELF7	hydroxyproline-rich glycoprotein family protein
bra-r.6	103847442	protein PAF1 homolog
bna-r.1	106384513	protein PAF1 homolog
bna-r.1	106372591	protein PAF1 homolog
ghi-r.1	107889105	protein PAF1 homolog
ghi-r.1	107891711	protein PAF1 homolog
ghi-r.1	107950655	protein PAF1 homolog
cit-r.1	102610204	protein PAF1 homolog
gma-u.5	100800148	protein PAF1 homolog
gma-u.5	100797526	protein PAF1 homolog
vvi-u.5	100254912	protein PAF1 homolog
ppo-u.5	7461933	protein PAF1 homolog
ppo-u.5	7470582	protein PAF1 homolog
mtr-u.5	11431121	protein PAF1 homolog
sly-u.5	101254885	protein PAF1 homolog
sot-r.1	102605366	protein PAF1 homolog
nta-r.1	107826626	protein PAF1 homolog
nta-r.1	107768468	protein PAF1 homolog
osa-u.5	4344699	protein PAF1 homolog
zma-u.5	100279273	uncharacterized LOC100279273
zma-u.5	100273854	uncharacterized LOC100273854
tae-r.2	123164491	protein PAF1 homolog
tae-r.2	123155727	protein PAF1 homolog
tae-r.2	123147263	protein PAF1 homolog
hvu-r.1	123413084	protein PAF1 homolog
hvu-r.1	123442375	protein PAF1 homolog
sbi-r.1	8069621	protein PAF1 homolog
bdi-r.1	100838919	protein PAF1 homolog
cre-r.1	CHLRE_12g520250v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0006368 [list] [network] transcription elongation by RNA polymerase II	(8 genes)	IEA
GO:0000724 [list] [network] double-strand break repair via homologous recombination	(43 genes)	IMP
GO:0009910 [list] [network] negative regulation of flower development	(50 genes)	IMP

GO CC

GO:0016593 [list] [network] Cdc73/Paf1 complex	(6 genes)	IDA
GO:0005634 [list] [network] nucleus	(10367 genes)	IDA ISM

GO MF

GO:0005515 [list] [network] protein binding

(5363 genes)

IPI

Protein

NP_178091.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, chlo 1

(predict for NP_178091.2)

Subcellular
localization
TargetP

chlo 6

(predict for NP_178091.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for ELF7	ath-r.7 for ELF7	ath-m.9 for ELF7	ath-e.2 for ELF7	ath-m.4.bio for ELF7	ath-m.4.hor for ELF7	ath-m.4.lig for ELF7	ath-m.4.str for ELF7	ath-m.4.tis for ELF7	bra-r.6 for 103847442	bna-r.1 for 106384513	bna-r.1 for 106372591	ghi-r.1 for 107889105	ghi-r.1 for 107891711	ghi-r.1 for 107950655	cit-r.1 for 102610204	gma-u.5 for 100800148	gma-u.5 for 100797526	vvi-u.5 for 100254912	ppo-u.5 for 7461933	ppo-u.5 for 7470582	mtr-u.5 for 11431121	sly-u.5 for 101254885	sot-r.1 for 102605366	nta-r.1 for 107826626	nta-r.1 for 107768468	osa-u.5 for 4344699	zma-u.5 for 100279273	zma-u.5 for 100273854	tae-r.2 for 123164491	tae-r.2 for 123155727	tae-r.2 for 123147263	hvu-r.1 for 123413084	hvu-r.1 for 123442375	sbi-r.1 for 8069621	bdi-r.1 for 100838919	cre-r.1 for CHLRE_12g520250v5

Ortholog

Ortholog ID: 7467

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

ELF7

Function^*

hydroxyproline-rich glycoprotein family protein

protein PAF1 homolog

uncharacterized LOC100279273

uncharacterized LOC100273854

protein PAF1 homolog

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3
sly03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	5
osa03013	Nucleocytoplasmic transport	3
osa03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	3
zma03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	3
zma03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00510	N-Glycan biosynthesis	3
tae04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	8
tae00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03008	Ribosome biogenesis in eukaryotes	3
cre03040	Spliceosome	3
cre03013	Nucleocytoplasmic transport	2
cre03015	mRNA surveillance pathway	2

Expression

Expression pattern

Entrez Gene ID^*

844312

103847442

106384513

106372591

107889105

107891711

107950655

102610204

100800148

100797526

100254912

7461933

7470582

11431121

101254885

102605366

107826626

107768468

4344699

100279273

100273854

123155727

123068194

123059779

123413084

123442375

8069621

100838919

5722595

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to ELF7 (ath-u.5 coexpression data)

Top 50 enrichment test to ELF7 (ath-u.5 coexpression data)


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	9	1	2	3	1	2	1	2	1	1	1	2	1	2	3	2	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to ELF7 (ath-u.5 coexpression data)

Top 50 enrichment test to ELF7 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**