ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-u.5	9269069	protein CHUP1, chloroplastic
osa-r.6	9269069	protein CHUP1, chloroplastic
osa-m.8	9269069	protein CHUP1, chloroplastic
osa-e.1	9269069	protein CHUP1, chloroplastic
osa-u.5	9270397	protein CHUP1, chloroplastic
zma-u.5	109941797	protein CHUP1, chloroplastic-like
ath-u.5	CHUP1	Hydroxyproline-rich glycoprotein family protein
gma-u.5	100785291	protein CHUP1, chloroplastic
gma-u.5	100802696	protein CHUP1, chloroplastic
gma-u.5	100813394	protein CHUP1, chloroplastic
sly-u.5	101267989	protein CHUP1, chloroplastic
vvi-u.5	100259307	protein CHUP1, chloroplastic
ppo-u.5	7489375	protein CHUP1, chloroplastic
mtr-u.5	11442126	protein CHUP1, chloroplastic

functional annotation

KEGG

GO BP

GO:0009658 [list] [network] chloroplast organization

(65 genes)

IEA

GO CC

GO:0009707 [list] [network] chloroplast outer membrane

(39 genes)

IEA

GO MF

Protein

XP_015620447.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 7, nucl 1, cyto 1, vacu 1, E.R. 1, cyto_nucl 1, E.R._vacu 1, cyto_E.R. 1

(predict for XP_015620447.1)

Subcellular
localization
TargetP

mito 4

(predict for XP_015620447.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 9269069	osa-r.6 for 9269069	osa-m.8 for 9269069	osa-e.1 for 9269069	osa-u.5 for 9270397	zma-u.5 for 109941797	ath-u.5 for CHUP1	gma-u.5 for 100785291	gma-u.5 for 100802696	gma-u.5 for 100813394	sly-u.5 for 101267989	vvi-u.5 for 100259307	ppo-u.5 for 7489375	mtr-u.5 for 11442126

Ortholog ID: 8966

Species

osa

tae

hvu

bdi

zma

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

CHUP1

Function^*

protein CHUP1, chloroplastic

protein CHUP1, chloroplastic-like

Hydroxyproline-rich glycoprotein family protein

protein CHUP1, chloroplastic

protein CHUP1, chloroplastic-like

protein CHUP1, chloroplastic

protein CHUP1, chloroplastic-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00710	Carbon fixation by Calvin cycle	4
osa01200	Carbon metabolism	4
osa00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00250	Alanine, aspartate and glutamate metabolism	3
tae00260	Glycine, serine and threonine metabolism	3
tae00630	Glyoxylate and dicarboxylate metabolism	3
tae01200	Carbon metabolism	3
tae01210	2-Oxocarboxylic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00260	Glycine, serine and threonine metabolism	5
tae00630	Glyoxylate and dicarboxylate metabolism	5
tae01200	Carbon metabolism	5
tae00250	Alanine, aspartate and glutamate metabolism	3
tae01210	2-Oxocarboxylic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00630	Glyoxylate and dicarboxylate metabolism	2
hvu01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00630	Glyoxylate and dicarboxylate metabolism	4
bdi01200	Carbon metabolism	4
bdi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00860	Porphyrin metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01200	Carbon metabolism	10
ath00630	Glyoxylate and dicarboxylate metabolism	6
ath00710	Carbon fixation by Calvin cycle	5
ath00260	Glycine, serine and threonine metabolism	3
ath04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00710	Carbon fixation by Calvin cycle	3
gma01200	Carbon metabolism	3
gma00010	Glycolysis / Gluconeogenesis	2
gma01230	Biosynthesis of amino acids	2
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00195	Photosynthesis	3
gma01200	Carbon metabolism	2
gma03010	Ribosome	2
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00630	Glyoxylate and dicarboxylate metabolism	4
sly00260	Glycine, serine and threonine metabolism	3
sly01200	Carbon metabolism	3
sly00670	One carbon pool by folate	2
sly00785	Lipoic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	8
bra00710	Carbon fixation by Calvin cycle	6
bra00620	Pyruvate metabolism	3
bra00630	Glyoxylate and dicarboxylate metabolism	2
bra00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00630	Glyoxylate and dicarboxylate metabolism	4
vvi01200	Carbon metabolism	4
vvi04146	Peroxisome	3
vvi00260	Glycine, serine and threonine metabolism	3
vvi00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00710	Carbon fixation by Calvin cycle	2
ppo01200	Carbon metabolism	2
ppo00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01200	Carbon metabolism	6
ghi00260	Glycine, serine and threonine metabolism	5
ghi00630	Glyoxylate and dicarboxylate metabolism	5
ghi00670	One carbon pool by folate	4
ghi00785	Lipoic acid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01200	Carbon metabolism	7
ghi00260	Glycine, serine and threonine metabolism	6
ghi00630	Glyoxylate and dicarboxylate metabolism	6
ghi00670	One carbon pool by folate	4
ghi00785	Lipoic acid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00630	Glyoxylate and dicarboxylate metabolism	4
sot01200	Carbon metabolism	3
sot00710	Carbon fixation by Calvin cycle	2
sot00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00030	Pentose phosphate pathway	3
nta00230	Purine metabolism	3
nta00970	Aminoacyl-tRNA biosynthesis	2
nta01200	Carbon metabolism	2
nta01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta01200	Carbon metabolism	3
nta00030	Pentose phosphate pathway	2
nta00230	Purine metabolism	2
nta01230	Biosynthesis of amino acids	2

Expression

Expression pattern

Entrez Gene ID^*

9269069

9270397

123183226

123069348

123451403

100830416

109941797

822157

100813394

100802696

101267989

103875358

100259307

7489375

11442126

107934797

107946456

106349398

106410120

102581030

102618828

107778512

107823870

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 9269069 (osa-u.5 coexpression data)

Top 50 enrichment test to 9269069 (osa-u.5 coexpression data)


Species	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	5	1	1	3	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 9269069 (osa-u.5 coexpression data)

Top 50 enrichment test to 9269069 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**