Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-u.4   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-r.6   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.9   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.notissue   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.tis   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.hor   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.bio   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.lig   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-e.1   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 gma-u.4   100782132   mediator of RNA polymerase II transcription subunit 15a-like 
 gma-u.4   100783762   mediator of RNA polymerase II transcription subunit 15a 
 gma-u.4   100792913   mediator of RNA polymerase II transcription subunit 15a 
 ppo-u.4   18096675   mediator of RNA polymerase II transcription subunit 15a 
 ppo-u.4   7470541   mediator of RNA polymerase II transcription subunit 15a 
 ppo-u.4   112323243   mediator of RNA polymerase II transcription subunit 15a-like 
 mtr-u.4   11430217   mediator of RNA polymerase II transcription subunit 15a 
 mtr-u.4   11442044   mediator of RNA polymerase II transcription subunit 15a 
 sly-u.4   101257852   mediator of RNA polymerase II transcription subunit 15a 
 osa-u.4   4346348   mediator of RNA polymerase II transcription subunit 15a 

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Top 50 coexpressed genes to NRB4 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath20   Citrate cycle (TCA cycle)  1 64 -
 ath3013   Nucleocytoplasmic transport  3 103 -
 ath3018   RNA degradation  2 113 -
 ath3015   mRNA surveillance pathway  3 119 -
 ath4120   Ubiquitin mediated proteolysis  2 155 -

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ath:NRB4 (mediator of RNA polymerase II transcription subunit 15a-like protein) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-m.4.str
for
NRB4
ath-u.4
for
NRB4
ath-r.6
for
NRB4
ath-m.9
for
NRB4
ath-m.4.notissue
for
NRB4
ath-m.4.tis
for
NRB4
ath-m.4.hor
for
NRB4
ath-m.4.bio
for
NRB4
ath-m.4.lig
for
NRB4
ath-e.1
for
NRB4
gma-u.4
for
100782132
gma-u.4
for
100783762
gma-u.4
for
100792913
ppo-u.4
for
18096675
ppo-u.4
for
7470541
ppo-u.4
for
112323243
mtr-u.4
for
11430217
mtr-u.4
for
11442044
sly-u.4
for
101257852
osa-u.4
for
4346348
1 AT5G08560 transducin family protein / WD-40 repeat family protein 830756 At5g08560 5.5 5.4
 4.0
 5.3
 5.2
 2.6
 3.6
 3.4
 2.7
 4.0
 0.5
0.4
 1.8
1.6
 1.2
1.1
 1.4
0.6
 2.0
0.6
 1.1
0.6
 2.1
1.4
 3.8
1.7
 1.1
-1.1
 2.5
2 AT5G16680 RING/FYVE/PHD zinc finger superfamily protein 831529 At5g16680 5.4 7.4
 7.7
 5.0
 15.2
 4.7
 1.7
 3.9
 1.1
 5.3
 3.5
3.5
 5.6
5.5
 4.6
3.8
 4.7
4.4
 4.8
4.2
 4.3
3.7
 3.2
1.8
 4.2
3.3
 4.1
 3.1
2.6
3 AT5G47480 RGPR-like protein 834798 At5g47480 5.0 7.5
 7.5
 5.5
 4.2
 2.0
 3.7
 3.0
 1.9
 6.8
 4.9
4.8
 6.6
6.0
 5.8
5.2
 3.5
3.4
 3.1
1.7
 3.6
3.2
 5.4
4.8
 6.6
5.3
 6.0
4.5
 5.1
4.1
4 AT3G29075 glycine-rich protein 822552 At3g29075 4.9 1.9
 1.6
 1.7
 66.1
 0.2
 2.0
 1.4
 -0.3
 0.4
 1.7
0.5
 1.7
0.1
 2.1
0.9
 3.7
2.5
 3.8
1.3
 3.7
2.3
 1.1
 2.0
 -0.2
-0.4
 2.1
5 AT1G02080 transcription regulator 839244 At1g02080 4.9 8.2
 7.3
 6.9
 2.8
 1.4
 4.1
 3.1
 1.6
 7.3
 4.1
2.6
 6.7
4.9
 4.4
3.1
 4.3
3.3
 3.7
2.4
 4.2
3.4
 6.2
 5.8
 5.1
 4.9
0.6
6 AT2G24360 Protein kinase superfamily protein 816972 At2g24360 4.8 3.5
 3.0
 3.0
 16.4
 1.1
 2.4
 3.1
 -0.4
 0.4
 1.4
1.2
 2.7
2.1
 2.6
2.5
 3.5
3.0
 2.9
2.2
 3.6
3.5
 1.8
0.7
 4.4
3.2
 2.8
2.3
 3.5
3.0
7 AT3G57890 Tubulin binding cofactor C domain-containing protein 824958 At3g57890 4.7 4.7
 4.9
 3.3
 66.9
 0.2
 4.0
 1.0
 1.2
 3.5
 1.9
1.5
 3.5
3.1
 3.4
2.2
 2.2
0.3
 2.6
0.4
 2.6
0.9
 3.5
2.9
 2.8
2.2
 4.5
 1.5
8 AT3G53390 Transducin/WD40 repeat-like superfamily protein 824507 At3g53390 4.7 4.9
 4.7
 3.8
 60.6
 4.4
 4.2
 2.7
 1.4
 5.1
 2.7
1.4
 1.7
1.2
 2.6
1.9
 3.0
1.7
 2.5
0.7
 2.7
1.5
 1.2
 2.4
 2.5
2.5
 4.2
9 SWI2 switch 2 839417 At1g03750 4.6 3.9
 2.7
 4.0
 36.6
 4.7
 0.8
 2.4
 0.7
 2.3
 2.2
 1.2
 1.5
 -0.6
 0.4
 -0.4
 2.0
 3.5
 2.0
 2.3
10 MOS14 ARM repeat superfamily protein 836381 At5g62600 4.6 4.2
 2.7
 4.6
 37.0
 2.1
 2.6
 0.9
 0.4
 4.3
 1.8
0.9
 1.1
1.0
 2.4
1.7
 1.3
0.8
 2.3
1.4
 1.2
0.9
 1.2
 2.4
 2.9
 0.2
11 AT3G52220 leukocyte immunoglobulin-like receptor family A protein 824387 At3g52220 4.4 1.5
 0.5
 2.1
 44.9
 2.7
 1.9
 1.1
 1.0
 -0.6
 0.8
0.7
 1.9
1.5
 1.4
1.2
 1.0
0.8
 1.2
0.8
 0.9
0.6
 -1.4
 0.5
 0.4
 -0.3
12 AT3G09100 mRNA capping enzyme family protein 820064 At3g09100 4.3 3.6
 3.2
 3.1
 9.4
 0.3
 1.8
 3.5
 2.0
 0.2
 3.1
1.6
 3.4
2.9
 2.5
2.0
 2.7
0.6
 2.8
1.7
 2.3
0.4
 1.9
0.7
 2.3
1.7
 2.1
1.2
 3.2
3.0
13 ABCB20 P-glycoprotein 20 824698 At3g55320 4.3 5.8
 5.3
 4.7
 12.1
 1.1
 1.4
 2.9
 1.2
 4.5
 2.1
1.1
 5.5
4.8
 5.0
3.8
 3.0
2.3
 3.3
2.9
 3.3
2.5
 2.6
1.2
 5.3
5.1
 6.8
 3.6
2.2
14 AT1G80810 Tudor/PWWP/MBT superfamily protein 844420 At1g80810 4.2 2.1
 1.5
 2.1
 39.1
 0.4
 2.3
 1.3
 0.5
 0.8
 1.9
1.3
 4.5
3.7
 3.2
2.7
 5.6
2.2
 3.7
1.6
 5.7
2.3
 4.2
4.0
 3.6
1.3
 3.8
0.5
 2.4
2.1
15 LARP1c winged-helix DNA-binding transcription factor family protein 829743 At4g35890 4.2 4.2
 4.0
 3.3
 46.2
 1.8
 2.6
 1.2
 1.4
 4.8
 4.7
4.5
 6.6
4.8
 5.6
5.1
 2.3
1.7
 2.6
1.9
 2.5
1.6
 2.8
2.3
 4.6
3.2
 2.4
2.3
 1.6
16 KAK HECT ubiquitin protein ligase family protein KAK 830017 At4g38600 4.2 8.5
 7.3
 7.4
 3.6
 1.9
 4.7
 3.5
 3.1
 7.6
 5.0
3.8
 7.1
6.6
 5.6
5.3
 4.3
3.5
 4.7
3.8
 4.4
3.4
 6.4
 8.3
 7.1
6.9
 3.1
17 AT3G15180 ARM repeat superfamily protein 820749 At3g15180 4.2 3.5
 2.3
 3.8
 26.9
 1.2
 1.0
 1.6
 3.1
 1.9
 0.7
 0.4
 0.3
 0.6
 1.7
 0.4
 -0.4
 1.8
 0.1
 0.6
18 AT4G31170 Protein kinase superfamily protein 829245 At4g31170 4.2 0.9
 0.8
 0.8
 24.8
 0.4
 1.5
 2.4
 0.4
 -1.2
 1.4
1.2
 2.7
2.1
 2.6
2.5
 3.5
3.0
 2.9
2.2
 3.6
3.5
 1.8
0.7
 4.4
3.2
 2.8
2.3
 3.5
3.0
19 NERD GW repeat- and PHD finger-containing protein NERD 816147 At2g16485 4.0 4.2
 4.4
 2.8
1.0
 2.6
 1.4
 0.2
 4.6
 3.5
3.2
 8.8
6.3
 6.3
5.7
 4.0
3.9
 3.6
3.3
 3.9
3.8
 2.0
2.0
 4.6
3.2
 4.5
2.9
 4.8
4.8
20 AT5G04460 RING/U-box superfamily protein 830324 At5g04460 4.0 4.2
 4.3
 3.0
 124.0
 2.0
 2.0
 2.1
 -0.4
 2.0
 2.9
2.2
 4.4
3.6
 2.5
2.3
 4.3
2.5
 4.2
2.3
 4.5
2.6
 2.1
2.0
 3.9
3.3
 4.0
2.9
 2.0
1.0
21 LUH LEUNIG-like protein 817830 At2g32700 3.9 5.3
 4.8
 4.4
 20.8
 1.9
 1.9
 3.1
 1.0
 3.3
 3.0
2.9
 4.3
3.7
 3.4
3.3
 3.7
3.0
 3.3
1.7
 3.8
3.2
 5.3
3.7
 3.0
2.3
 2.0
1.8
 2.3
0.5
22 AT1G74640 alpha/beta-Hydrolases superfamily protein 843803 At1g74640 3.9 0.9
 1.2
 0.3
 53.4
 -0.5
 1.8
 1.2
 1.8
 0.8
 1.7
0.2
 -0.1
-0.3
 1.2
0.5
 -0.6
 -0.8
 -0.8
 0.6
 -1.0
 2.0
 0.1
23 FRS8 FAR1-related sequence 8 844341 At1g80010 3.9 5.4
 5.6
 3.8
 95.0
 1.8
 1.3
 1.9
 2.6
 3.6
 0.4
0.2
 2.5
1.3
 1.8
1.6
 0.7
0.7
 2.5
0.9
 0.9
0.7
 2.1
1.5
 2.9
1.5
 1.3
-0.0
 1.5
24 AT1G10390 Nucleoporin autopeptidase 837579 At1g10390 3.9 6.0
 6.9
 3.4
 13.0
 0.2
 3.3
 2.3
 2.1
 6.1
 4.0
3.7
 5.7
5.3
 4.9
4.7
 5.6
4.3
 3.6
3.0
 5.7
4.3
 4.5
-0.2
 5.6
0.2
 4.5
 5.8
0.8
25 AT1G04140 Transducin family protein / WD-40 repeat family protein 839272 At1g04140 3.8 5.2
 4.6
 4.4
 35.7
 1.1
 3.9
 1.3
 2.2
 4.9
 5.9
5.2
 7.6
7.0
 7.7
5.9
 4.4
4.4
 4.3
2.6
 5.0
4.8
 3.0
2.4
 8.2
4.5
 4.1
2.5
 2.0
1.7
26 AT5G10950 Tudor/PWWP/MBT superfamily protein 830962 At5g10950 3.8 -0.2
 -0.9
 0.6
 22.4
 1.6
 2.2
 1.8
 0.2
 -1.1







1.5
0.0
27 LBA1 RNA helicase 834747 At5g47010 3.7 6.2
 6.2
 4.5
 144.5
 1.1
 3.5
 1.0
 2.3
 7.2
 2.5
2.3
 5.9
3.7
 4.7
3.1
 3.8
3.2
 4.5
2.4
 3.4
2.9
 3.7
 4.4
 4.1
3.6
 4.6
28 CID7 CTC-interacting domain 7 817168 At2g26280 3.7 2.4
 1.3
 2.9
 76.5
 1.4
 1.6
 1.4
 0.9
 2.0
 3.4
2.4
 4.0
2.2
 1.9
1.5
 4.6
4.3
 3.3
2.5
 4.6
4.0
 2.7
 2.9
 1.8
 2.3
1.9
29 OXS2 CCCH-type zinc finger protein with ARM repeat domain-containing protein 818790 At2g41900 3.7 3.1
 2.7
 2.7
 120.9
 0.9
 2.0
 2.2
 -0.3
 3.7
 1.9
1.5
 4.7
2.8
 3.5
3.5
 2.6
1.9
 2.6
2.2
 2.5
2.2
 5.3
2.1
 4.6
3.9
 2.4
2.1
 1.8
30 SDH1-1 succinate dehydrogenase 1-1 836809 At5g66760 3.7 3.0
 2.8
 2.3
 76.0
 2.5
 1.0
 1.8
 2.3
 2.8
 1.1
0.4
 1.7
1.4
 1.9
1.5
 3.0
0.7
 1.4
-0.1
 3.4
0.6
 2.7
 2.4
 1.7
 2.2
31 NTL9 NAC transcription factor-like 9 829710 At4g35580 3.7 2.1
 1.7
 1.9
 62.9
 1.3
 2.4
 2.4
 1.5
 1.5
 1.2
0.8
 2.7
2.6
 2.3
1.9
 1.2
-0.9
 1.2
1.1
 1.2
-0.5
 1.7
1.2
 3.4
2.8
 0.6
0.4
32 AT1G79090 topoisomerase II-associated protein 844250 At1g79090 3.7 4.5
 4.1
 3.6
 125.3
 1.0
 1.9
 0.7
 2.9
 4.2
 2.7
2.4
 4.4
4.0
 3.8
3.5
 3.4
3.1
 4.7
3.7
 3.5
3.0
 3.9
3.3
 6.0
3.9
 5.8
4.1
 2.8
1.3
33 UNE12 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 828126 At4g02590 3.7 0.6
 0.1
 0.8
 184.9
 0.0
 1.1
 0.9
 1.5
 0.4
 1.5
1.2
 1.2
1.0
 2.0
1.4
 1.2
1.1
 2.1
0.6
 1.6
1.3
 0.5
0.4
 2.4
2.1
 2.4
-0.0
 0.9
0.9
34 SPL14 squamosa promoter binding protein-like 14 838692 At1g20980 3.6 5.1
 4.4
 4.5
 72.9
 0.8
 2.3
 1.4
 0.5
 3.4
 0.7
0.2
 1.5
1.4
 1.9
1.6
 2.7
1.6
 3.8
1.9
 2.4
1.2
 3.4
 5.0
2.7
35 DCP5 decapping 5 839152 At1g26110 3.6 5.8
 5.5
 4.6
 52.5
 0.1
 3.2
 1.8
 1.7
 5.2
 7.8
6.8
 6.2
6.2
 5.7
5.0
 6.9
4.6
 5.6
5.2
 6.3
4.7
 5.3
 3.1
 4.2
 7.6
3.7
36 AT3G48760 DHHC-type zinc finger family protein 824037 At3g48760 3.6 0.5
 0.4
 0.5
 224.1
 0.7
 1.2
 2.0
 1.0
 0.3









37 HB-1 homeobox-1 839740 At1g28420 3.6 4.3
 4.4
 3.1
 107.7
 1.7
 2.0
 3.1
 0.1
 4.7
 4.3
4.0
 6.6
5.3
 3.7
3.5
 4.9
4.4
 3.9
3.3
 4.7
4.4
 4.2
3.3
 7.0
6.0
 2.0
1.8
 4.0
3.5
38 AT3G02280 Flavodoxin family protein 820417 At3g02280 3.6 1.5
 0.9
 1.8
 245.3
 1.1
 2.7
 1.3
 0.4
 0.8
 1.5
 1.7
 1.2
 1.1
 2.2
 1.2
 2.1
2.0
 1.7
1.1
 1.7
 1.8
39 SMG7 Telomerase activating protein Est1 832060 At5g19400 3.6 5.8
 5.1
 4.9
 8.4
 1.9
 3.9
 3.1
 2.7
 5.0
 1.8
1.6
 3.5
2.8
 2.6
2.6
 3.2
0.8
 3.8
2.7
 2.8
0.6
 4.2
2.2
 5.7
5.1
 5.4
3.4
 3.0
40 AT4G39140 RING/U-box superfamily protein 830069 At4g39140 3.6 2.2
 2.5
 1.3
 57.7
 2.7
 1.4
 2.1
 0.3
 2.5
 1.7
1.1
 2.6
1.9
 1.7
1.6
 2.3
1.0
 2.1
1.7
 1.9
0.7
 2.8
0.7
 4.1
3.3
 2.1
-0.5
 2.1
41 CUL3B cullin 3B 843303 At1g69670 3.6 3.3
 2.2
 3.5
 37.2
 2.4
 1.7
 1.5
 1.1
 0.8
 1.2
1.0
 2.7
2.5
 2.3
1.6
 0.7
0.6
 2.0
0.1
 0.5
0.4
 1.6
1.1
 1.7
1.2
 1.9
1.9
 2.6
1.5
42 AT2G25970 KH domain-containing protein 817137 At2g25970 3.5 3.5
 3.6
 2.5
 89.5
 -0.4
 2.5
 1.4
 2.3
 5.6
 4.5
4.0
 4.4
4.1
 3.7
3.0
 2.4
2.0
 2.3
2.2
 3.1
2.3
 3.7
3.5
 5.6
3.3
 1.9
 3.1
43 ftsh7 FTSH protease 7 823859 At3g47060 3.5 4.5
 4.0
 3.7
 27.9
 2.5
 1.5
 2.6
 1.8
 2.3
 4.1
0.2
 2.9
0.0
 3.5
-0.7
 3.4
2.1
 3.8
2.6
 3.7
2.2
 1.5
 1.9
 2.3
 1.4
44 AT5G42950 GYF domain-containing protein 834307 At5g42950 3.5 4.7
 3.6
 4.5
 38.0
 0.4
 3.3
 2.2
 0.8
 4.6
 4.2
3.2
 7.0
5.4
 5.4
4.6
 2.8
 3.3
 2.7
 4.5
 4.8
 4.8
 3.0
45 AT1G07990 SIT4 phosphatase-associated family protein 837314 At1g07990 3.5 4.6
 4.6
 3.4
 151.5
 2.3
 1.5
 4.0
 1.1
 3.1
 2.3
2.2
 4.1
4.0
 3.4
2.2
 5.6
4.3
 3.8
3.0
 5.9
4.0
 3.5
0.7
 3.9
1.7
 4.1
1.7
 3.3
2.4
46 CLC-C chloride channel C 835052 At5g49890 3.5 2.5
 2.9
 1.4
 1053.3
 2.2
 0.9
 2.0
 -1.9
 0.6
 1.0
1.0
 -0.1
-0.7
 -0.0
-0.2
 -0.2
-0.2
 1.5
1.3
 -0.0
-0.1
 0.7
0.1
 2.4
0.2
 -0.8
-1.2
 2.6
0.6
47 TTA2 fibronectin type III domain protein (DUF1423) 825525 At3g63500 3.4 2.4
 1.3
 2.9
 739.2
 2.4
 1.9
 1.3
 -0.4
 1.1
 2.1
1.8
 5.7
4.1
 4.8
3.8
 4.4
4.1
 4.6
3.8
 4.3
3.9
 2.8
 2.9
 3.9
 4.3
48 AT3G60110 DNA-binding bromodomain-containing protein 825181 At3g60110 3.4 1.8
 1.5
 1.6
 1083.4
 2.9
 -0.5
 1.2
 -2.1
 1.8
 0.8
-0.2
 2.6
2.0
 2.2
1.1
 3.8
2.5
 3.3
2.7
 3.5
2.4
 1.9
 2.7
 0.5
 -0.2
-0.2
49 FIP1[V] FIP1[V]-like protein 835916 At5g58040 3.4 3.6
 2.4
 3.8
 191.3
 2.0
 2.4
 3.1
 -0.3
 4.0
 3.4
2.9
 6.2
4.9
 5.8
4.6
 4.2
3.9
 4.0
3.8
 4.0
3.8
 2.2
 5.3
 3.4
 2.9
50 DUO3 Homeodomain-like superfamily protein 842765 At1g64570 3.4 4.9
 5.2
 3.4
 102.2
 2.2
 2.3
 1.0
 0.7
 4.1
 1.0
-0.2
 2.9
2.4
 2.5
1.9
 4.0
 4.9
 3.5
 3.5
3.3
 4.1
4.0
 2.9
 5.0
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