Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-u.4   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-r.6   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.9   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.notissue   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.tis   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.str   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.hor   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.lig   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-e.1   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 gma-u.4   100782132   mediator of RNA polymerase II transcription subunit 15a-like 
 gma-u.4   100783762   mediator of RNA polymerase II transcription subunit 15a 
 gma-u.4   100792913   mediator of RNA polymerase II transcription subunit 15a 
 ppo-u.4   18096675   mediator of RNA polymerase II transcription subunit 15a 
 ppo-u.4   7470541   mediator of RNA polymerase II transcription subunit 15a 
 ppo-u.4   112323243   mediator of RNA polymerase II transcription subunit 15a-like 
 mtr-u.4   11430217   mediator of RNA polymerase II transcription subunit 15a 
 mtr-u.4   11442044   mediator of RNA polymerase II transcription subunit 15a 
 sly-u.4   101257852   mediator of RNA polymerase II transcription subunit 15a 
 osa-u.4   4346348   mediator of RNA polymerase II transcription subunit 15a 

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Top 50 coexpressed genes to NRB4 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath4144   Endocytosis  3 146 2.22
 ath61   Fatty acid biosynthesis  1 43 -
 ath71   Fatty acid degradation  1 47 -
 ath270   Cysteine and methionine metabolism  1 124 -
 ath3040   Spliceosome  2 203 -

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ath:NRB4 (mediator of RNA polymerase II transcription subunit 15a-like protein) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-m.4.bio
for
NRB4
ath-u.4
for
NRB4
ath-r.6
for
NRB4
ath-m.9
for
NRB4
ath-m.4.notissue
for
NRB4
ath-m.4.tis
for
NRB4
ath-m.4.str
for
NRB4
ath-m.4.hor
for
NRB4
ath-m.4.lig
for
NRB4
ath-e.1
for
NRB4
gma-u.4
for
100782132
gma-u.4
for
100783762
gma-u.4
for
100792913
ppo-u.4
for
18096675
ppo-u.4
for
7470541
ppo-u.4
for
112323243
mtr-u.4
for
11430217
mtr-u.4
for
11442044
sly-u.4
for
101257852
osa-u.4
for
4346348
1 AT2G01600 ENTH/ANTH/VHS superfamily protein 814689 At2g01600 5.0 4.3
 4.1
 3.4
 209.1
 2.3
 1.6
 1.1
 0.1
 3.1
 3.3
3.1
 3.6
2.6
 3.3
2.4
 4.3
1.3
 2.5
1.6
 4.3
1.5
 2.2
 4.6
 3.5
-0.1
 2.4
-0.2
2 AT1G15130 Endosomal targeting BRO1-like domain-containing protein 838077 At1g15130 4.7 6.7
 7.0
 4.7
 32.1
 1.9
 3.2
 2.0
 2.1
 3.8
 5.8
5.4
 8.2
7.3
 6.5
6.1
 4.1
3.5
 5.8
3.1
 4.0
3.9
 2.3
 7.6
 5.5
4.1
 5.9
3 AT5G35370 S-locus lectin protein kinase family protein 833498 At5g35370 4.5 1.9
 1.3
 2.1
 518.3
 0.8
 2.4
 0.9
 0.6
 0.6
 -0.5
 -0.1
 -0.7
 1.4
0.6
 0.9
0.3
 0.9
0.3
 -0.1
 0.6
 0.0
 -0.3
-0.5
4 AT4G12230 alpha/beta-Hydrolases superfamily protein 826831 At4g12230 4.5 2.2
 2.0
 1.9
 280.5
 1.4
 1.4
 1.6
 -0.2
 2.8
 1.1
0.4
 1.6
0.5
 1.3
0.6
 -0.1
-0.4
 1.2
-0.5
 0.5
-0.3
 0.9
 1.4
 -0.2
 1.7
5 KEG protein kinases;ubiquitin-protein ligase 831197 At5g13530 4.5 5.3
 6.0
 3.2
 1009.7
 0.6
 2.9
 2.9
 -0.1
 4.2
 3.6
2.5
 6.6
5.7
 4.5
4.0
 5.1
 3.9
 4.9
 3.6
1.9
 5.8
5.3
 2.7
 4.0
6 DL3 dynamin-like 3 842251 At1g59610 4.4 7.4
 6.2
 6.6
 4.9
 2.0
 3.1
 2.7
 1.7
 5.0
 2.1
1.6
 4.2
2.7
 3.6
3.5
 3.5
1.7
 4.7
0.0
 3.6
1.8
 4.2
2.9
 2.7
2.2
 4.3
0.1
 4.1
1.4
7 AT4G18300 Trimeric LpxA-like enzyme 827556 At4g18300 4.3 3.5
 2.8
 3.3
 69.1
 2.4
 2.5
 1.4
 2.1
 1.0
 1.4
-1.2
 4.1
0.2
 2.2
-0.2
 -0.2
 0.7
 -0.1
 3.8
 2.4
 0.6
 0.5
8 AT2G02370 SNARE associated Golgi protein family 814768 At2g02370 4.3 0.9
 1.4
 0.1
 530.5
 1.9
 1.9
 0.3
 -1.4
 -1.0
 -0.3
-0.6
 1.9
0.5
 1.7
0.7
 0.1
-0.1
 1.7
-0.7
 0.2
0.0
 0.9
 2.7
 0.7
 0.3
9 EML3 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein 831142 At5g13020 4.1 1.7
 1.5
 1.4
 155.7
 0.4
 1.1
 2.9
 1.5
 3.6
 0.6
0.6
 2.1
1.9
 1.4
1.3
 4.3
2.8
 4.1
2.9
 4.3
2.8
 2.2
1.3
 2.6
2.0
 2.1
1.5
 3.1
1.3
10 MKP1 mitogen-activated protein kinase phosphatase 1 824693 At3g55270 4.0 3.3
 4.0
 1.7
 61.4
 0.9
 2.8
 2.0
 0.5
 4.4
 4.3
3.2
 7.6
4.4
 5.4
3.4
 2.5
2.0
 3.9
3.0
 2.5
2.0
 3.6
 5.4
 2.1
 3.8
11 AT2G26920 Ubiquitin-associated/translation elongation factor EF1B protein 817233 At2g26920 4.0 5.5
 4.5
 5.0
 11.1
 1.6
 3.0
 3.3
 1.2
 5.0
 1.7
1.4
 5.1
4.5
 4.0
3.3
 3.4
1.2
 5.6
1.7
 3.8
1.9
 1.2
0.9
 3.3
2.4
 2.8
2.0
 1.7
12 AT1G07990 SIT4 phosphatase-associated family protein 837314 At1g07990 4.0 4.6
 4.6
 3.4
 151.5
 2.3
 3.5
 1.5
 1.1
 3.1
 2.3
2.2
 4.1
4.0
 3.4
2.2
 5.6
4.3
 3.8
3.0
 5.9
4.0
 3.5
0.7
 3.9
1.7
 4.1
1.7
 3.3
2.4
13 AT2G32850 Protein kinase superfamily protein 817846 At2g32850 3.9 4.9
 4.3
 4.2
 97.5
 1.7
 1.6
 2.5
 2.2
 4.1
 1.4
1.1
 3.4
1.9
 2.9
2.1
 -0.3
 -0.8
 -0.2
 2.7
 2.9
 1.0
 2.5
0.8
14 AT5G16680 RING/FYVE/PHD zinc finger superfamily protein 831529 At5g16680 3.9 7.4
 7.7
 5.0
 15.2
 4.7
 5.4
 1.7
 1.1
 5.3
 3.5
3.5
 5.6
5.5
 4.6
3.8
 4.7
4.4
 4.8
4.2
 4.3
3.7
 3.2
1.8
 4.2
3.3
 4.1
 3.1
2.6
15 RAPTOR1 Regulatory-associated protein of TOR 1 820032 At3g08850 3.9 7.2
 6.3
 6.1
 20.4
 2.6
 3.2
 2.9
 1.7
 7.4
 4.2
3.8
 5.8
4.1
 4.9
3.3
 5.7
3.3
 4.9
3.5
 5.3
3.2
 4.5
 7.6
 6.4
 3.8
3.3
16 MUG5 3768779 At3g06940 3.9

1.4
 455.7
 1.1
 1.0
 2.5
 1.4










17 AT1G56290 CwfJ-like family protein 842082 At1g56290 3.9 3.2
 1.6
 3.8
 1263.3
 1.1
 0.7
 0.7
 0.2
 2.3
 2.7
1.8
 4.5
3.2
 5.0
3.0
 2.6
 2.1
 3.0
 1.8
 3.3
 0.6
 3.2
18 AT1G72390 nuclear receptor coactivator 843571 At1g72390 3.9 7.1
 8.0
 4.3
 61.8
 1.7
 2.7
 1.2
 1.4
 12.1
 7.0
6.9
 8.1
6.5
 5.8
5.5
 4.9
4.8
 5.4
4.3
 5.4
5.0
 4.5
 9.4
 5.4
 7.1
19 AT5G55600 Agenet and bromo-adjacent homology (BAH) domain-containing protein 835654 At5g55600 3.8 3.3
 2.7
 2.9
 91.9
 2.1
 2.4
 2.0
 0.8
 0.5
 1.4
0.4
 3.7
1.9
 2.4
1.4
 3.9
1.7
 4.2
2.4
 3.8
1.8
 2.3
1.6
 1.8
1.4
 1.3
0.5
 3.8
20 AT1G78420 RING/U-box superfamily protein 844178 At1g78420 3.8 0.6
 1.5
 -0.5
 1289.7
 2.0
 1.0
 -0.7
 1.3
 1.9
 0.7
-0.2
 0.4
-0.7
 -0.1
-0.3
 2.8
2.7
 1.6
0.2
 2.7
2.6
 0.6
 1.3
 0.4
 1.2
0.9
21 AT4G28370 RING/U-box superfamily protein 828953 At4g28370 3.8 3.5
 2.6
 3.4
 310.2
 1.5
 1.2
 1.0
 2.4
 1.9
 3.5
3.5
 1.9
1.7
 1.8
1.7
 1.3
0.8
 1.5
0.6
 1.0
0.8
 1.9
 3.3
 1.4
-0.1
 1.3
22 ERMO2 Sec23/Sec24 protein transport family protein 819896 At3g07100 3.8 5.6
 5.8
 3.9
 302.6
 0.8
 2.1
 1.9
 0.2
 6.3
 3.4
2.5
 6.4
6.0
 4.9
4.1
 2.8
2.3
 2.2
2.2
 3.0
2.3
 6.0
 4.1
 4.9
 3.1
23 AT3G03790 ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein 821145 At3g03790 3.8 3.1
 3.0
 2.3
 1838.5
 1.6
 1.6
 -0.4
 -1.4
 1.8
 1.8
1.7
 4.0
3.1
 1.9
1.3
 2.5
 1.6
 2.3
 3.1
 4.0
 2.7
 1.4
24 CHX20 cation/H+ exchanger 20 824539 At3g53720 3.8 0.6
 0.3
 0.8
 1160.3
 0.1
 0.2
 0.4
 -0.9
 1.9
 0.3
-0.0
 0.5
0.2
 -0.2
-0.2
 -1.1
 -1.5
 -0.9
 0.5
-0.1
 2.0
0.8
 -0.7
 0.4
25 AT5G61530 small G protein family protein / RhoGAP family protein 836274 At5g61530 3.7 1.2
 1.4
 0.6
 1126.2
 2.5
 1.6
 1.4
 -0.9
 -0.9
 3.0
0.1
 1.2
-0.0
 0.3
0.2
 0.7
 0.5
 0.5
 0.2
 1.3
 1.6
 0.4
26 AT5G64270 splicing factor 836548 At5g64270 3.7 3.6
 3.8
 2.4
 173.0
 0.5
 1.5
 2.7
 2.1
 3.6
 0.8
0.1
 3.3
2.7
 3.3
3.1
 1.5
0.3
 1.7
0.8
 1.6
0.1
 4.1
 4.1
 5.1
 4.2
27 RCD1 WWE protein-protein interaction domain protein family 840115 At1g32230 3.7 2.3
 2.1
 1.9
 234.2
 2.5
 2.0
 0.9
 1.4
 0.7
 3.6
2.2
 5.3
4.7
 3.3
2.4
 3.3
3.2
 4.1
4.0
 3.1
3.0
 1.3
0.6
 4.4
1.7
 1.2
0.5
 3.6
28 AT5G19900 PRLI-interacting factor 832112 At5g19900 3.6 1.4
 1.4
 1.0
 117.3
 2.6
 1.6
 1.8
 1.9
 0.6
 2.4
 1.8
 1.0
 3.4
2.6
 2.4
0.9
 3.4
2.7
 1.8
0.1
 3.2
0.1
 2.9
-0.2
 0.7
-0.1
29 ckl8 casein kinase I-like 8 834350 At5g43320 3.6 2.3
 2.7
 1.2
 3128.1
 2.1
 -0.4
 1.6
 1.3
 0.8
 1.3
1.3
 3.6
3.4
 2.2
1.8
 1.8
1.4
 1.9
1.3
 1.9
1.6
 1.3
1.0
 2.2
2.0
 1.7
0.9
 1.2
-0.1
30 SAM1 S-adenosylmethionine synthetase 1 839501 At1g02500 3.6 2.1
 2.6
 1.0
 3360.0
 -0.1
 0.8
 1.0
 -2.8
 2.5
 2.4
2.1
 1.8
1.2
 1.9
1.6
 -0.3
-0.3
 -0.8
-0.9
 -0.4
-0.4
 1.8
1.0
 1.2
0.3
 0.7
0.4
 1.0
0.2
31 LINC4 branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5);little nuclei4 836706 At5g65770 3.6

3.9
 28.4
 -0.0
 2.6
 2.6
 0.0
4.2
3.3
 3.4
3.2
 3.1
2.8
 3.0
 4.1
 2.9
 2.8
 2.9
 1.8
 3.7
32 AT3G50590 Transducin/WD40 repeat-like superfamily protein 824223 At3g50590 3.5 8.6
 8.6
 6.4
 599.7
 0.5
 1.3
 2.1
 -0.2
 5.5
 4.4
4.4
 6.7
6.1
 4.9
3.7
 3.7
 2.3
 3.8
 5.2
1.0
 5.2
1.7
 5.5
 4.7
33 KAK HECT ubiquitin protein ligase family protein KAK 830017 At4g38600 3.5 8.5
 7.3
 7.4
 3.6
 1.9
 4.2
 4.7
 3.1
 7.6
 5.0
3.8
 7.1
6.6
 5.6
5.3
 4.3
3.5
 4.7
3.8
 4.4
3.4
 6.4
 8.3
 7.1
6.9
 3.1
34 AT5G48370 Thioesterase/thiol ester dehydrase-isomerase superfamily protein 834890 At5g48370 3.5 1.9
 2.0
 1.3
 736.0
 1.3
 1.4
 0.1
 -0.3
 0.9
 1.4
1.4
 1.9
1.3
 1.4
1.2
 1.1
0.7
 0.2
-0.5
 0.9
0.8
 3.1
2.1
 0.7
0.7
 1.7
-0.8
 0.7
35 AT3G09100 mRNA capping enzyme family protein 820064 At3g09100 3.5 3.6
 3.2
 3.1
 9.4
 0.3
 4.3
 1.8
 2.0
 0.2
 3.1
1.6
 3.4
2.9
 2.5
2.0
 2.7
0.6
 2.8
1.7
 2.3
0.4
 1.9
0.7
 2.3
1.7
 2.1
1.2
 3.2
3.0
36 AT5G51740 Peptidase family M48 family protein 835248 At5g51740 3.5 1.9
 1.4
 1.8
 1080.1
 2.0
 0.7
 1.4
 2.3
 1.3
 -0.0
-0.9
 1.0
-0.2
 0.9
-1.5
 -0.2
 0.5
 -0.5
 2.6
0.5
 2.6
1.1
 -0.4
 0.3
37 AT1G18160 Protein kinase superfamily protein 838395 At1g18160 3.4 2.6
 2.7
 1.8
 367.3
 0.3
 1.1
 2.5
 0.9
 2.8
 1.9
1.3
 3.1
2.0
 2.0
1.8
 2.4
2.3
 3.9
1.6
 2.1
2.0
 1.5
0.3
 1.8
1.6
 1.8
0.9
 3.8
3.0
38 AT1G09920 TRAF-type zinc finger-like protein 837524 At1g09920 3.4 1.2
 2.0
 0.2
 125.5
 1.5
 2.5
 1.9
 2.0
 -0.2
 0.3
-0.3
 0.9
0.5
 1.0
0.7
 0.7
 -1.0
 0.5
 0.1
-0.8
 1.1
0.5
 0.8
-0.4
 1.3
0.2
39 AT5G08560 transducin family protein / WD-40 repeat family protein 830756 At5g08560 3.4 5.4
 4.0
 5.3
 5.2
 2.6
 5.5
 3.6
 2.7
 4.0
 0.5
0.4
 1.8
1.6
 1.2
1.1
 1.4
0.6
 2.0
0.6
 1.1
0.6
 2.1
1.4
 3.8
1.7
 1.1
-1.1
 2.5
40 AT1G02890 AAA-type ATPase family protein 839507 At1g02890 3.4 4.6
 4.7
 3.2
 199.0
 2.6
 1.1
 3.3
 1.4
 3.2
 3.2
2.8
 4.9
4.5
 4.0
3.8
 3.7
2.5
 2.7
2.1
 3.2
1.9
 5.8
1.8
 5.2
5.0
 4.9
3.2
 8.3
41 FHY3 far-red elongated hypocotyls 3 821781 At3g22170 3.4 4.1
 2.8
 4.3
 111.7
 0.5
 1.1
 3.7
 1.0
 2.7
 4.6
2.9
 3.7
3.1
 2.8
2.6
 3.9
2.9
 4.2
3.2
 3.2
2.7
 3.8
 2.3
 1.3
42 LACS4 AMP-dependent synthetase and ligase family protein 828484 At4g23850 3.4 2.0
 1.6
 1.8
 3091.6
 -0.0
 0.5
 2.8
 0.7
 0.0
 1.2
0.0
 1.5
0.1
 1.7
1.1
 0.8
0.5
 0.4
-0.3
 0.4
0.2
 0.1
 2.0
 0.7
-0.0
 1.3
1.2
43 SMP2 Pre-mRNA splicing Prp18-interacting factor 829866 At4g37120 3.4 4.5
 4.2
 3.6
 28.6
 2.3
 2.3
 3.3
 1.8
 1.1
 2.0
0.8
 2.6
2.3
 2.4
2.3
 4.6
2.8
 3.9
2.2
 4.4
2.3
 1.8
 2.9
 1.5
-0.2
 4.3
44 PAH2 phosphatidic acid phosphohydrolase 2 834298 At5g42870 3.4 3.1
 3.2
 2.3
 748.2
 2.3
 1.3
 1.9
 0.7
 0.6
 4.7
3.3
 3.4
2.8
 3.9
2.4
 2.4
1.6
 2.4
2.3
 2.0
1.3
 2.6
2.1
 4.9
2.8
 5.0
2.2
 1.6
1.1
45 AT5G55860 weak chloroplast movement under blue light protein (DUF827) 835681 At5g55860 3.3 1.8
 1.7
 1.5
 1100.4
 1.7
 1.3
 1.4
 -0.3
 0.1
 1.1
0.7
 2.4
0.3
 3.1
0.6
 1.7
 0.9
 1.5
 1.5
0.2
 3.0
-1.0
 1.7
0.5
 2.0
46 ALA2 aminophospholipid ATPase 2 834447 At5g44240 3.3 6.1
 6.4
 4.1
 170.2
 2.9
 1.7
 1.1
 1.8
 4.9
 4.7
1.6
 5.5
2.7
 3.8
0.9
 2.5
 2.2
 2.4
 2.4
 4.3
 3.8
 1.9
1.0
47 AT2G35330 RING/U-box superfamily protein 818100 At2g35330 3.3 2.2
 1.2
 2.7
 3089.5
 1.2
 -0.4
 0.0
 0.3
 0.5
 3.9
2.4
 3.2
2.4
 2.6
2.4
 3.8
0.8
 1.0
0.7
 3.9
0.7
 4.7
 3.1
 1.1
-0.7
 3.2
48 AT3G16940 calmodulin-binding transcription activator 820950 At3g16940 3.3 3.3
 2.8
 2.9
 244.5
 0.6
 1.8
 1.8
 -0.4
 1.4
 5.1
2.3
 3.4
2.3
 2.9
2.6
 2.7
1.6
 3.0
2.0
 2.6
1.6
 3.1
0.4
 3.4
1.1
 2.4
2.4
 4.1
49 FAAH fatty acid amide hydrolase 836565 At5g64440 3.3 3.7
 3.8
 2.5
 757.3
 0.9
 1.2
 4.9
 -0.2
 1.2
 2.4
1.7
 2.4
1.8
 2.6
1.6
 0.8
 0.4
 0.7
 -1.2
 -0.7
 0.8
0.7
 1.2
50 AT5G56240 hapless protein 835723 At5g56240 3.3 3.0
 2.8
 2.3
 79.2
 1.7
 2.4
 1.5
 -0.4
 2.3


2.9
2.8
 4.4
4.1
 2.5
2.4

5.1
 3.1
The preparation time of this page was 3.5 [sec].