Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4   GRF1   growth-regulating factor 1 
 ath-r.6   GRF1   growth-regulating factor 1 
 ath-m.9   GRF1   growth-regulating factor 1 
 ath-m.4.notissue   GRF1   growth-regulating factor 1 
 ath-m.4.tis   GRF1   growth-regulating factor 1 
 ath-m.4.str   GRF1   growth-regulating factor 1 
 ath-m.4.hor   GRF1   growth-regulating factor 1 
 ath-m.4.bio   GRF1   growth-regulating factor 1 
 ath-m.4.lig   GRF1   growth-regulating factor 1 
 ath-e.1   GRF1   growth-regulating factor 1 
 ath-u.4   GRF2   growth-regulating factor 2 
 gma-u.4   GRF19   growth-regulating factor 
 gma-u.4   GRF21   growth-regulating factor 
 ppo-u.4   7472639   growth-regulating factor 1 
 ppo-u.4   7497735   growth-regulating factor 1 
 ppo-u.4   7464777   growth-regulating factor 1 
 mtr-u.4   25482044   growth-regulating factor 1 
 sly-u.4   101252681   growth-regulating factor 1-like 
 sly-u.4   101244049   growth-regulating factor 2-like 
 osa-u.4   4350711   growth-regulating factor 8-like 
 osa-u.4   4333990   growth-regulating factor 6-like 
 osa-u.4   9268363   growth-regulating factor 7-like 

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Top 50 coexpressed genes to GRF1 (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath909   Sesquiterpenoid and triterpenoid biosynthesis  1 23 -
 ath100   Steroid biosynthesis  1 36 -
 ath500   Starch and sucrose metabolism  1 172 -

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ath:GRF1 (growth-regulating factor 1) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-u.4
for
GRF1
ath-r.6
for
GRF1
ath-m.9
for
GRF1
ath-m.4.notissue
for
GRF1
ath-m.4.tis
for
GRF1
ath-m.4.str
for
GRF1
ath-m.4.hor
for
GRF1
ath-m.4.bio
for
GRF1
ath-m.4.lig
for
GRF1
ath-e.1
for
GRF1
ath-u.4
for
GRF2
gma-u.4
for
GRF19
gma-u.4
for
GRF21
ppo-u.4
for
7472639
ppo-u.4
for
7497735
ppo-u.4
for
7464777
mtr-u.4
for
25482044
sly-u.4
for
101252681
sly-u.4
for
101244049
osa-u.4
for
4350711
osa-u.4
for
4333990
osa-u.4
for
9268363
1 GRF2 growth-regulating factor 2 829930 At4g37740 12.5 10.0
 11.7
 141.7
 5.7
 2.4
 2.4
 1.6
 2.0
 5.3
 12.5
 14.9
14.2
 13.8
13.8
 9.0
6.8
 6.8
4.4
 4.4
2.9
4.3
 4.3
 4.1
2.2
 4.1
4.0
 4.0
2.2
2 GRF3 growth-regulating factor 3 818213 At2g36400 12.2 10.3
 10.8
 3.2
 4.3
 3.6
 1.8
 4.2
 0.8
 8.4
 7.7
5.3
 2.8
2.2
 3.4
2.2
 1.8
 1.8
 2.3
 4.1
 3.1
2.9
 2.7
2.5


3 AN3 SSXT family protein 832968 At5g28640 6.1 5.2
 5.3
 100.6
 4.4
 1.7
 2.2
 1.1
 0.4
 0.9
 4.4
 3.2
2.9
 3.1
3.0
 2.1
1.8
 3.3
3.3
 2.4
2.0
 2.7
1.4
 3.6
3.3
 2.6
2.6
 2.6
 3.7
 3.7
4 AT2G20515 pollen Ole e I family allergen protein 816573 At2g20515 5.2 4.6
 4.5
 1887.4
 1.9
 0.9
 1.5
 -0.2
 -0.1
 1.4
 4.2
 1.0
 1.3
 2.2
0.4
 1.6
0.7
 1.6
-0.3
 2.1
 0.7
 0.9
 1.3
 2.3
 1.4
5 ARF17 auxin response factor 17 844120 At1g77850 5.2 4.7
 4.2
 6.9
 1.2
 4.1
 2.7
 2.7
 -0.6
 3.4
 1.8
 -0.4
-1.5
 -0.1
-0.9
 -1.1
-1.4
 -0.0
-0.6
 -0.9
-1.4
 0.5
 0.2
 0.9


6 GRF4 growth-regulating factor 4 824457 At3g52910 5.0 5.0






2.5
 7.7
5.3
 2.8
2.2
 3.4
2.2
 1.8
 1.8
 2.3
 4.1
 3.1
2.9
 2.7
2.5


7 XTH5 xyloglucan endotransglucosylase/hydrolase 5 831233 At5g13870 4.8 4.2
 4.1
 3251.2
 0.5
 0.3
 2.2
 2.8
 0.8
 2.4
 2.4
-0.8
 1.9
1.7
 2.5
1.7
 -0.6
-0.9
 -0.7
-1.0
 -0.7
-1.5
 1.5
0.3
 1.4
0.5
 0.9
-0.8
 0.1
 0.5
 0.2
8 HAM1 GRAS family transcription factor 819124 At2g45160 4.7 3.8
 4.4
 6117.5
 1.5
 0.1
 1.9
 0.1
 0.5
 1.7
 4.7
3.5
 2.6
2.5
 2.8
1.7
 0.4
0.3
 1.7
1.3
 1.2
0.7
 1.5
1.3
 2.7
0.8
 1.6
0.7
 0.1
-0.4
 1.0
0.3
 1.3
0.8
9 DEL2 DP-E2F-like 2 831348 At5g14960 4.6 4.6
 3.3
 442.5
 2.0
 2.1
 -0.9
 2.3
 -0.5
 5.8
 3.4
2.2
 -0.3
-0.4
 -0.2
-0.4
 1.0
 1.1
 1.3
 0.6
 -0.3
-0.3
 0.2
-0.1
 1.3
0.5
 1.2
1.0
 1.3
1.3
10 AT1G75140 uncharacterized protein 843851 At1g75140 4.5 4.7
 3.1
 125.0
 1.3
 2.6
 -0.2
 1.7
 1.2
 4.7
 2.8
2.1
 0.6
0.6
 -0.5
-0.9
 -0.4
-1.1
 0.0
-0.0
 -0.9
-1.3
 0.7
 -0.3
 0.3
 0.6
 0.6
 1.1
11 IDD5 indeterminate(ID)-domain 5 814738 At2g02070 4.5 3.8
 4.0
 405.0
 1.2
 2.8
 0.2
 1.4
 -0.1
 2.1
 2.6










12 AT3G13175 uncharacterized protein 820507 At3g13175 4.5 3.3
 4.4
 169.2
 1.0
 2.6
 0.7
 -0.3
 -0.1
 3.0
 3.8
-0.7
 0.8
0.8
 0.6
0.3
 0.3
 2.0
 -0.2
 0.9
 0.1
 -0.0


13 PIA1 Ankyrin repeat family protein 830677 At5g07840 4.4 4.9
107.4




1.5
 3.0
1.3
 -1.1
-1.4
 -0.5
-0.9
 -0.0
-0.7
 0.7
-0.4
 0.6
-0.2
 -0.5
 -0.9
 0.6
 0.2
 -0.1
 0.1
14 AT1G48230 nodulin MtN21 /EamA-like transporter family protein 841243 At1g48230 4.4 3.4
 4.2
 1011.4
 0.5
 1.4
 2.3
 0.6
 0.8
 2.4
 2.5
1.5
 0.3
0.3
 1.5
0.8
 0.6
-0.1
 0.7
0.0
 -0.0
-0.8
 1.3
 2.2
0.4
 1.4
-0.4
 0.5
 -0.5
 -0.5
15 ARF6 auxin response factor 6 839913 At1g30330 4.3 3.7
 3.7
 2.5
 0.5
 5.2
 0.9
 0.8
 2.5
 4.7
 3.5
 1.8
1.0
 2.7
2.1
 1.0
0.7
 1.7
0.8
 1.5
1.4
 2.0
0.6
 -0.1
 -0.7
 1.7
1.4
 1.3
0.8
 1.2
0.1
16 AT2G28790 Pathogenesis-related thaumatin superfamily protein 817428 At2g28790 4.3 3.8
 3.6
 207.5
 1.8
 1.7
 3.2
 0.0
 0.8
 1.7
 3.9
 1.9
1.6
 1.5
1.5
 3.6
0.4
 1.9
0.8
 1.6
0.6
 0.4
 0.6
 0.9
 1.1
 1.8
 1.3
17 AT1G73620 Pathogenesis-related thaumatin superfamily protein 843696 At1g73620 4.3 3.5
 3.9
 647.1
 0.9
 1.2
 1.6
 0.6
 -1.1
 3.9
 3.0
2.6
 1.1
0.7
 1.5
1.0
 1.7
0.3
 1.6
1.0
 1.0
-0.6
 1.5
 3.4
 1.5
 0.7
 2.7
 2.0
18 AT1G68490 translocase subunit seca 843178 At1g68490 4.2 3.8
 3.5
 95.2
 0.6
 2.2
 1.4
 1.6
 0.1
 2.4
 2.3
0.2
 0.5
0.5
 1.1
1.0
 0.6
0.5
 1.1
0.2
 0.2
-0.2
 2.1
0.7
 1.6
0.3
 0.9
0.4
 -1.1
 -0.4
 -0.4
19 AT3G19120 PIF / Ping-Pong family of plant transposase 821446 At3g19120 4.2 4.0
 3.4
 4916.1
 2.6
 0.4
 0.3
 0.8
 -0.1
 1.7
 2.9
 1.9
1.1
 1.6
1.4
 0.9
0.4
 1.4
0.4
 1.5
0.4
 0.8
 -0.3
 -0.0


20 AT3G63290 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 825504 At3g63290 4.2 4.5
 2.8
 5551.6
 1.6
 0.0
 0.4
 3.1
 0.2
 2.2
 2.6
 2.2
0.1
 2.3
0.3
 0.6
 -0.5
 0.4
 -0.6
 0.6
 0.4
 -0.2
 -0.2
 0.2
21 HAM2 GRAS family transcription factor 825234 At3g60630 4.2 3.6
 3.7
 2715.8
 1.6
 1.3
 -0.2
 0.7
 2.6
 1.6
 4.7
3.5
 2.6
2.5
 2.8
1.7
 0.4
0.3
 1.7
1.3
 1.2
0.7
 1.5
1.3
 2.7
0.8
 1.6
0.7
 0.1
-0.4
 1.0
0.3
 1.3
0.8
22 AT1G05805 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 837090 At1g05805 4.1 4.2
 2.9
 26.5
 -1.8
 4.3
 0.7
 2.1
 1.1
 4.8
 1.9
0.8
 2.3
 2.1
 0.7
-0.3
 1.4
-0.4
 0.8
-0.8
 0.1
 1.2
 -0.0
 -0.7
-0.7
 -0.4
-0.6
 0.3
-0.5
23 GRF9 growth-regulating factor 9 819156 At2g45480 4.0 3.8






0.7
 3.6
 4.4
3.2
 3.1
2.7
 4.3
 3.4
 2.3
 1.0
 2.4
1.0
 3.9
1.3
 1.1
0.3
 1.9
0.8
 1.5
0.8
24 AT2G36350 Protein kinase superfamily protein 818208 At2g36350 3.9 3.7
 3.1
 1814.5
 2.4
 1.4
 0.4
 0.4
 1.5
 3.4
 3.9
3.2
 0.6
0.3
 0.9
0.7
 1.0
 2.1
 0.3
 1.9
1.4
 1.5
1.3
 2.1
0.3


25 AT2G18245 alpha/beta-Hydrolases superfamily protein 816340 At2g18245 3.9 3.2
 3.6
 348.2
 0.9
 2.2
 1.2
 1.2
 0.8
 3.8
 2.8
 0.4
-0.9
 0.4
-0.7
 -0.5
 -0.6
 -1.0
 1.3
 -0.8
 0.9
 1.2
 0.3
 0.7
26 AT1G56020 serine/arginine repetitive matrix-like protein 842053 At1g56020 3.9 4.5
 2.3
 8206.3
 3.3
 0.3
 0.1
 1.2
 -0.5
 0.7
 4.0
3.1
 2.2
1.1
 2.5
1.0
 3.4
1.4
 2.8
1.8
 3.0
1.0
 1.2
 2.0
1.8
 2.3
1.1
 1.1
1.0
 2.8
2.5
 2.6
1.1
27 HB33 homeobox protein 33 843861 At1g75240 3.9 3.7
 3.0
 1237.2
 1.9
 0.3
 0.8
 1.7
 2.7
 4.2
 4.7










28 AT1G09660 RNA-binding KH domain-containing protein 837494 At1g09660 3.9 3.2
 3.5
 2557.5
 0.4
 0.6
 1.9
 0.7
 0.2
 1.5
 1.3
0.8
 0.2
-0.4
 0.2
0.2
 0.4
0.2
 1.8
0.7
 1.3
1.2
 0.3
0.2
 0.1
0.1
 0.1
-0.2
 0.5
0.0
 0.5
0.3
 1.0
0.3
29 PMR5 Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein (DUF828) 835974 At5g58600 3.9 3.8
 2.9
 136.8
 0.6
 2.8
 0.7
 1.3
 1.3
 2.3
 3.8
 1.6
1.4
 2.3
2.0
 1.3
0.4
 0.2
-0.5
 0.5
0.3
 1.9
-0.6
 2.4
1.2
 1.0
-0.6
 0.5
 0.8
 -0.9
30 ACR4 ACT domain repeat 4 843236 At1g69040 3.8 3.5
 3.1
 165.8
 0.5
 3.2
 1.3
 1.1
 1.2
 0.7
 4.3
-0.0
 0.8
0.8
 0.6
0.1
 0.8
0.1
 1.7
0.6
 1.4
0.5
 0.3
-0.9
 -0.0
-0.1
 0.2
-0.9
 0.8
-0.3
 0.7
-0.5
 -0.3
-0.3
31 SQE2 squalene epoxidase 2 816814 At2g22830 3.8 2.9
 3.7
 248.8
 -0.1
 2.6
 -0.4
 3.5
 0.9
 2.6
 2.6
0.2
 1.3
1.0
 2.2
1.8
 0.2
-0.4
 0.4
-1.3
 -0.2
-0.6
 0.7
0.7
 2.0
0.9
 1.6
-0.3
 0.2
-0.5
 0.7
-1.2
 -0.0
-0.3
32 AT3G62630 stress response NST1-like protein (DUF1645) 825437 At3g62630 3.8 3.2
 3.3
 2507.9
 0.4
 0.8
 0.1
 2.4
 1.2
 3.5
 3.1
 2.3
2.3
 2.7
1.8
 2.3
2.0
 2.2
1.9
 0.9
0.7
 1.4
 1.6
 0.2
 1.3
 0.8
 0.0
33 GRF5 growth-regulating factor 5 820609 At3g13960 3.8 2.4
 4.2
 656.5
 2.9
 2.7
 0.1
 0.7
 1.9
 1.9
 3.8
 3.8
3.2
 3.6
3.5


3.2
2.9
 2.2
 1.3
 2.4
 4.4
 3.0
34 AT1G32190 alpha/beta-Hydrolases superfamily protein 840111 At1g32190 3.7 3.5
 3.0
 4053.8
 1.7
 0.4
 0.3
 2.4
 4.2
 1.5
 2.3
 -0.2
-0.4
 1.2
0.7
 0.8
-0.4
 0.3
0.2
 0.5
0.1
 1.8
 1.5
 2.6
 1.5
 0.6
 0.3
35 UBP22 ubiquitin-specific protease 22 830946 At5g10790 3.7 3.8
 2.7
 67.6
 -0.7
 3.5
 -1.9
 0.5
 -0.3
 2.0
 1.9
 0.6
0.4
 1.7
0.1
 -0.1
-0.5
 1.3
0.4
 0.5
0.3
 1.2
-0.6
 -0.3
-0.7
 0.4
-0.3
 -0.4
 0.0
 0.1
36 AT1G72340 NagB/RpiA/CoA transferase-like superfamily protein 843566 At1g72340 3.7 2.9
 3.6
 236.0
 0.4
 2.4
 0.6
 0.9
 0.8
 1.2
 2.2
0.1
 0.6
0.4
 0.3
-0.5
 0.4
0.1
 1.2
-0.8
 0.4
0.2
 -0.5
 -0.4
 0.4
 -0.7
 -0.1
 0.9
37 AT1G74800 Galactosyltransferase family protein 843819 At1g74800 3.7 3.6
 2.8
 1092.2
 0.3
 1.4
 1.2
 1.6
 1.9
 0.8
 2.5
0.7
 0.7
0.4
 0.8
0.5
 0.4
-0.9
 2.0
0.8
 0.6
0.0
 1.1
-0.2
 0.8
0.8
 0.6
-0.0
 0.9
0.3
 0.1
-0.6
 0.5
-0.2
38 TCP2 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 827568 At4g18390 3.7 3.3
 3.1
 100.0
 0.8
 2.9
 0.0
 2.3
 0.7
 3.4
 2.1
 2.3
1.8
 3.2
1.2
 0.5
0.3
 0.8
0.8
 0.6
0.3
 1.8
 1.4
0.9
 2.5
1.2


39 HB31 homeobox protein 31 838006 At1g14440 3.6 2.9
 3.4
 1074.0
 1.3
 1.2
 2.6
 1.4
 1.0
 1.1
 5.5
3.2
 2.9
2.8
 4.0
3.8
 3.5
3.2
 3.1
2.8
 2.0
1.5
 1.2
0.3
 3.7
2.4
 4.2
3.6
 1.4
1.1
 1.5
0.7
 1.2
0.7
40 AT1G23000 Heavy metal transport/detoxification superfamily protein 838908 At1g23000 3.6 2.9
 3.3
 1654.7
 3.6
 1.0
 2.2
 -0.1
 0.1
 2.2
 6.3
 2.8
1.1
 3.6
1.8
 1.3
0.6
 1.9
0.9
 1.5
0.9
 2.4
 1.1
 1.2


41 AT5G10780 ER membrane protein complex subunit-like protein 830945 At5g10780 3.6 3.3
 2.9
 43.1
 0.3
 3.0
 2.3
 0.9
 1.7
 4.9
 1.4
 0.3
-0.5
 -0.8
-1.2
 -0.0
-0.2
 0.2
-0.3
 0.4
0.0
 1.0
1.0
 -0.4
 0.7
 -1.3
 -0.0
 0.1
42 AT4G36180 Leucine-rich receptor-like protein kinase family protein 829775 At4g36180 3.6 3.3
 2.9
 613.5
 1.3
 1.8
 2.1
 0.5
 -0.4
 0.4
 4.3
2.2
 0.1
-0.0
 0.3
-0.0
 1.3
 1.5
 1.4
 2.9
0.8
 1.9
1.7
 1.4
1.2
 2.5
 5.1
 4.5
43 AT2G01630 O-Glycosyl hydrolases family 17 protein 814692 At2g01630 3.6 3.4
 2.7
 1783.1
 1.2
 0.7
 2.8
 1.1
 -0.7
 2.4
 4.0
1.0
 2.6
2.4
 3.7
2.3
 1.5
1.0
 3.4
2.2
 3.1
2.3
 2.2
1.1
 3.2
2.3
 3.0
1.7
 2.0
 3.5
 2.6
44 ADS2 16:0delta9 desaturase 2 817694 At2g31360 3.5 3.5
 2.6
 7.9
 2.4
 4.7
 1.3
 2.2
 -0.4
 3.4
 1.0










45 AT1G12850 Phosphoglycerate mutase family protein 837842 At1g12850 3.5 3.3
 2.9
 821.6
 0.1
 1.3
 2.1
 1.0
 1.9
 1.6
 2.5
1.4
 0.6
-1.5
 0.2
-1.0
 -0.4
-0.7
 0.9
0.5
 0.2
-0.3
 0.7
 1.4
 0.6
 -0.2
 -0.5
 0.6
46 BAT1 bidirectional amino acid transporter 1 814645 At2g01170 3.5 3.3
 2.8
 190.1
 -1.1
 2.4
 0.8
 1.1
 0.3
 5.2
 1.2
 0.1
-0.2
 0.8
-0.4
 0.5
0.5
 -0.0
-0.4
 0.4
-0.4
 0.5
 0.5
 0.3
 0.6
0.3
 0.9
0.6
 0.3
-0.5
47 HB4 homeobox-leucine zipper protein 4 819100 At2g44910 3.5 3.2
 2.9
 8893.8
 2.6
 -0.3
 0.7
 0.7
 -0.1
 0.8
 3.1










48 AT5G43020 Leucine-rich repeat protein kinase family protein 834317 At5g43020 3.5 3.0
 3.1
 708.3
 1.4
 1.3
 1.5
 2.2
 0.0
 2.2
 5.3
2.2
 2.0
1.9
 1.3
0.7
 1.8
0.1
 1.1
0.5
 1.7
0.4
 2.8
0.4
 1.8
0.9
 1.8
0.8
 1.2
 1.3
 1.0
49 IDD4 indeterminate(ID)-domain 4 814739 At2g02080 3.5 2.8
 3.3
 929.6
 0.9
 1.7
 0.8
 1.3
 0.8
 0.4
 2.9
1.0
 1.5
1.3
 2.0
2.0
 0.7
0.2
 0.9
0.7
 0.1
0.1
 1.2
1.1

-0.4
-0.9
 0.6
0.5
 0.8
0.2
50 AT3G56580 RING/U-box superfamily protein 824825 At3g56580








2.8
-0.6
 1.6
0.9
 1.4
0.9
 -0.5
-0.9
 0.2
-0.2
 -1.0
-1.2
 0.6
0.1
 0.3
 0.7
 0.6
 0.1
 -0.4
The preparation time of this page was 0.7 [sec].