Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4   PME1   pectin methylesterase inhibitor 1 
 ath-r.6   PME1   pectin methylesterase inhibitor 1 
 ath-m.9   PME1   pectin methylesterase inhibitor 1 
 ath-m.4.notissue   PME1   pectin methylesterase inhibitor 1 
 ath-m.4.tis   PME1   pectin methylesterase inhibitor 1 
 ath-m.4.str   PME1   pectin methylesterase inhibitor 1 
 ath-m.4.hor   PME1   pectin methylesterase inhibitor 1 
 ath-m.4.bio   PME1   pectin methylesterase inhibitor 1 
 ath-m.4.lig   PME1   pectin methylesterase inhibitor 1 
 ath-e.1   PME1   pectin methylesterase inhibitor 1 
 ath-u.4   AT1G62770   Plant invertase/pectin methylesterase inhibitor superfamily protein 
 ath-u.4   AT1G14890   Plant invertase/pectin methylesterase inhibitor superfamily protein 
 gma-u.4   100797734   pectinesterase inhibitor 7 
 gma-u.4   100810071   21 kDa protein 
 ppo-u.4   18094388   pectinesterase inhibitor 10 
 ppo-u.4   18094389   pectinesterase inhibitor 9 
 mtr-u.4   25494098   21 kDa protein 
 mtr-u.4   112421176   21 kDa protein-like 
 mtr-u.4   25491837   21 kDa protein 
 sly-u.4   101248953   21 kDa protein-like 
 osa-u.4   4342040   21 kDa protein 

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Top 50 coexpressed genes to PME1 (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath53   Ascorbate and aldarate metabolism  1 63 -
 ath260   Glycine, serine and threonine metabolism  1 70 -
 ath4070   Phosphatidylinositol signaling system  2 77 -
 ath562   Inositol phosphate metabolism  2 79 -
 ath40   Pentose and glucuronate interconversions  1 108 -

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ath:PME1 (pectin methylesterase inhibitor 1) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-u.4
for
PME1
ath-r.6
for
PME1
ath-m.9
for
PME1
ath-m.4.notissue
for
PME1
ath-m.4.tis
for
PME1
ath-m.4.str
for
PME1
ath-m.4.hor
for
PME1
ath-m.4.bio
for
PME1
ath-m.4.lig
for
PME1
ath-e.1
for
PME1
ath-u.4
for
AT1G62770
ath-u.4
for
AT1G14890
gma-u.4
for
100797734
gma-u.4
for
100810071
ppo-u.4
for
18094388
ppo-u.4
for
18094389
mtr-u.4
for
25494098
mtr-u.4
for
112421176
mtr-u.4
for
25491837
sly-u.4
for
101248953
osa-u.4
for
4342040
1 ZFP4 zinc finger protein 4 842928 At1g66140 5.0 4.9
 3.8
 27.0
 3.1
 3.7
 3.1
 2.2
 0.7
 1.7
 1.4
-0.5
 0.8
-0.5
 1.0
0.8
 0.1
-0.4
 0.3
-0.2
 -0.2
-0.5
 1.0
0.2
 0.2
0.2
 0.8
0.6
 -0.1
-0.9
 1.6
2 AT5G14880 Potassium transporter family protein 831340 At5g14880 4.5 3.9
 3.9
 67.9
 1.2
 3.2
 3.2
 1.4
 1.0
 2.2
 -1.1
-1.4
 0.5
-0.6
 1.3
0.4
 0.1
-0.4
 0.4
-0.9
 -0.3
-0.5
 0.5
0.4
 -0.7
-0.8
 0.1
-1.2
 0.4
-0.1
 1.0
0.8
3 AT3G06145 RING zinc finger protein 819788 At3g06145 4.4 4.7






2.7
 -0.3
 -0.0
 0.7
0.1
 1.3
0.7

0.9
-0.5
 0.2
-0.2
 1.2
-0.6
 -0.2
4 AT2G24580 FAD-dependent oxidoreductase family protein 816994 At2g24580 4.1 3.6
 3.5
 55.8
 0.8
 2.6
 2.5
 3.7
 -0.0
 2.0
 -0.0
 0.4
 2.1
 0.8
 0.3
-0.1
 0.4
-0.6
 0.7
0.5
 0.5
-0.1
 1.4
-1.1
 2.8
 0.8
0.2
5 AT2G42690 alpha/beta-Hydrolases superfamily protein 818869 At2g42690 4.0 3.4
 3.7
 33.8
 1.4
 2.4
 4.1
 3.7
 1.9
 2.3
 -0.0
 0.4
 -0.6
 -0.3
 0.0
 -0.7
 -0.5
 -0.9
 3.7
 0.6
-0.4
 -0.5
6 ATSPS4F Sucrose-phosphate synthase family protein 826603 At4g10120 4.0 3.8
 3.1
 8.1
 -0.1
 3.3
 2.4
 4.1
 1.3
 0.8
 -0.7
-1.1
 -0.2
-1.2
 0.4
0.4
 0.7
0.5
 1.3
0.1
 0.5
-0.5
 -0.5
-0.9
 0.7
-0.2
 0.8
-0.5
 1.2
0.1
 -0.7
-0.9
7 AT1G21050 MIZU-KUSSEI-like protein (Protein of unknown function, DUF617) 838699 At1g21050 3.9 4.0
 2.8
 694.7
 3.9
 1.9
 1.5
 0.9
 -0.6
 1.1
 -0.4
 2.1

0.3
 -0.3




8 ACR3 ACT domain repeat 3 844035 At1g76990 3.9 3.8
 2.9
 255.4
 0.6
 3.8
 3.6
 2.0
 1.7
 2.1
 -1.3
 0.2
 0.6
0.3
 -0.5
-0.6
 0.4
-0.7
 -0.3
-0.8
 0.8
0.1
 0.7
0.3
 0.2
-0.7
 0.1
-0.7
 -0.6
9 AT5G23920 uncharacterized protein 832457 At5g23920 3.8 3.1
 3.5
 109.1
 1.5
 2.2
 3.2
 2.7
 1.7
 2.5
 0.1
-0.8
 0.0
-0.5
 -0.4
-0.4
 -0.3
-0.5
 0.8
 0.9
 -0.3
 1.5
 -0.3
 -1.0
10 AT4G32270 Ubiquitin-like superfamily protein 829360 At4g32270 3.8 3.6
 3.0
 1535.8
 1.3
 0.8
 0.6
 1.7
 1.0
 0.4
 0.8
0.3
 2.2
0.3
 0.5
0.1
 -0.4
-0.5
 1.0
 1.4
 -0.6
 -0.1
 0.4
 1.1
 0.3
11 PDCB1 plasmodesmata callose-binding protein 1 836234 At5g61130 3.8 3.7
 2.9
 9.3
 0.8
 3.7
 3.9
 2.9
 -1.2
 5.0
 1.6
1.5
 2.2
1.3
 1.6
1.1
 0.8
0.8
 1.5
-0.6
 0.4
0.4
 2.5
1.1
 0.8
0.1
 -0.6
-0.8
 1.7
0.8
 1.1
0.1
12 LCR68 low-molecular-weight cysteine-rich 68 814744 At2g02130 3.8 3.0
 3.6
 1448.7
 1.1
 0.4
 1.4
 1.8
 1.4
 0.9
 1.2
1.0
 2.9
1.0
 1.2
-0.6
 2.6
1.3
 0.4
-0.8
 0.6
0.6
 1.5
-1.0
 1.0
0.7
 1.3
0.2
 0.9
0.2
 0.3
13 AT4G33770 Inositol 1,3,4-trisphosphate 5/6-kinase family protein 829519 At4g33770 3.8 2.7
 3.9
 389.5
 1.7
 2.7
 2.3
 0.1
 0.6
 0.6
 -0.5
-0.5
 0.3
-1.4
 1.4
0.1
 0.7
0.2
 0.6
0.6
 0.0
-1.0
 0.9
-1.0
 0.1
-0.6
 -0.2
-0.8
 -1.1
-1.4
 0.3
-0.3
14 AT5G06790 cotton fiber protein 830569 At5g06790 3.7 4.4
 2.1
 47.6
 0.9
 3.2
 2.5
 3.3
 0.7
 2.1
 1.7
-1.4
 0.1
-0.5
 -0.5
-0.6
 1.5
-0.2
 0.1
 -0.6
 -1.6
-1.9
 0.7
0.1
 0.7
-0.1
 -0.2
15 AT2G37050 Leucine-rich repeat protein kinase family protein 818281 At2g37050 3.7 3.5
 3.0
 406.2
 0.7
 1.7
 2.2
 2.7
 -0.8
 -0.2
 0.4
 0.9
 0.6
0.1
 0.1
0.0
 -0.3
-1.6
 -1.0
-1.2
 1.2
1.0
 0.5
0.1
 -0.1
-1.3
 -0.1
 -0.4
-0.4
16 AT2G41480 peroxidase superfamily protein 818746 At2g41480 3.7 2.9
 3.5
 804.1
 1.3
 1.6
 0.0
 -0.3
 -0.6
 0.2
 1.5
0.3
 1.9
1.6
 1.6
1.0
 0.6
0.2
 0.3
0.2
 -0.1
-0.4
 0.4
-0.2
 1.5
0.1
 0.6
-1.5
 1.1
-0.8
 0.1
17 AUF1 F-box family protein 844146 At1g78100 3.7 4.0
 2.3
 440.2
 2.2
 1.8
 0.8
 1.8
 -0.1
 1.6
 1.0
-0.2
 0.7
-0.6

-0.1
-0.1
 -0.4
-1.4


-0.1
18 AT2G36970 UDP-Glycosyltransferase superfamily protein 818271 At2g36970 3.6 3.7
 2.6
 2973.9
 -0.4
 0.9
 1.0
 1.2
 -0.8
 2.3
 -0.3
-1.4
 -0.5
-0.9

0.3
 -0.4


0.7
0.5
 0.8
19 AT5G01090 Concanavalin A-like lectin family protein 831840 At5g01090 3.6 2.8
 3.4
 206.3
 0.5
 2.5
 1.1
 1.8
 0.6
 2.4
 1.6
0.9
 3.0
0.9
 0.8
0.4
 1.6
1.4
 -0.1
-0.5
 -0.4
-0.4
 1.9
1.4
 1.1
-0.4
 0.5
0.4
 -0.8
 0.6
20 LBO1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 821696 At3g21420 3.6 2.8
 3.4
 2487.2
 -1.3
 1.0
 0.7
 0.8
 1.0
 2.1
 -0.4
 1.3
 0.7
0.5
 0.2
-0.4
 -0.2
 -0.7
 0.5
 0.5
 0.0
 -1.0
 -0.5
21 PYL1 PYR1-like 1 834722 At5g46790 3.6 2.9
 3.3
 31.3
 3.9
 3.7
 2.6
 1.3
 2.9
 2.2
 0.0
-0.0
 -0.3
-0.5
 1.5
1.1
 -0.2
-0.3
 -0.1
 0.5
 1.4
 0.2
 2.0
 1.5
1.2
 1.0
22 SHR GRAS family transcription factor 829919 At4g37650 3.6 2.7
 3.4
 1415.4
 1.2
 1.2
 0.6
 2.0
 -0.4
 3.1
 -0.3
 1.6
 0.6
0.3
 1.0
0.8
 0.4
-0.1
 0.5
-0.0
 2.7
0.6
 -0.1
-0.1
 1.2
0.2
 1.5
0.9
 0.7
-0.3
23 AT5G56040 Leucine-rich receptor-like protein kinase family protein 835702 At5g56040 3.6 3.2
 3.0
 42.8
 0.8
 2.5
 3.8
 2.8
 0.2
 0.9
 -0.1
-0.2
 -0.1
-0.4
 0.2
-0.3
 0.3
0.0
 -0.1
-1.0
 -1.0
-1.3
 1.2
0.2
 0.3
-0.1
 0.9
-1.6
 -0.3
 -0.2
-0.4
24 AT1G10380 Putative membrane lipoprotein 837577 At1g10380 3.5 3.6
 2.4
 1917.9
 2.0
 1.8
 -0.8
 1.0
 1.1
 1.6
 0.4
 0.4
 -0.2
-0.6
 0.6
0.2
 0.6
 -0.5
 1.7
 0.7
 0.0
 0.3
25 AMT1;2 ammonium transporter 1;2 842786 At1g64780 3.5 3.0
 3.1
 121.4
 4.5
 3.0
 3.8
 1.4
 1.8
 2.6
 0.4
-0.7
 -0.5
-1.2

0.5
0.1
 0.4
-0.1
 0.6
-0.8
 -0.3
-0.9
 -0.4
-0.9
 0.5
-0.3
 0.6
0.2
26 AT5G41050 Pollen Ole e 1 allergen and extensin family protein 834107 At5g41050 3.4 3.0
 2.9
 62.0
 0.1
 2.9
 4.5
 2.7
 2.1
 1.1
 1.3
0.0
 3.6
0.8
 1.5
0.5
 0.9
0.9
 -0.0
-0.9
 -0.2
-0.3
 -0.1
-0.6
 0.6
-0.8
 0.2
-0.4
 2.2
 -0.7
27 SQD2 sulfoquinovosyldiacylglycerol 2 831888 At5g01220 3.4 3.0
 2.9
 819.4
 2.2
 0.6
 1.7
 1.5
 -0.7
 0.0
 -1.1
 -1.8
 1.0
0.1
 1.0
-0.4
 -0.3
-1.1
 0.3
0.0
 0.7
0.1
 -0.2
-0.6
 0.6
0.3
 0.2
-0.4
 0.1
-0.5
28 PHO1;H1 EXS (ERD1/XPR1/SYG1) family protein 843205 At1g68740 3.4 3.3
 2.6
 364.8
 0.0
 2.0
 2.0
 2.1
 0.6
 0.7
 -1.2
 -1.9
 0.3
0.3
 0.4
-0.3
 0.6
 -0.3
 -0.2
 1.2
 -0.6
 -0.0
 -0.9
29 AT1G12020 uncharacterized protein 28717234 At1g12020 3.4 3.6






2.2
 0.8
0.7
 2.8
0.9
 0.9
0.8
 0.4
0.0
 -0.1
-0.2
 -0.1
-0.2
 0.8
 -1.5
 -0.7
 0.2
 0.5
-0.1
30 PAP12 purple acid phosphatase 12 817261 At2g27190 3.4 2.7
 3.2
 3763.5
 1.2
 -0.0
 2.2
 1.2
 -1.2
 -0.0
 1.2
0.4
 0.8
-1.3
 0.6
0.1
 0.6
0.1
 1.0
0.8
 1.7
0.2
 0.7
0.7
 -0.0
-1.0
 0.0
-0.4
 1.3
 0.2
-0.0
31 AT4G29100 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 829031 At4g29100 3.4 3.1
 2.7
 307.2
 0.5
 2.2
 1.2
 1.2
 2.2
 2.3
 0.7
0.0
 1.7
1.6
 1.3
1.2
 0.3
0.3
 -0.5
-1.1
 -0.3
-0.8
 0.9
0.6
 1.3
0.7
 0.1
-0.5
 0.1
-0.4
 -1.2
-1.6
32 UMAMIT30 nodulin MtN21 /EamA-like transporter family protein 828176 At4g01450 3.3 3.0
 2.8
 182.5
 1.3
 3.3
 1.4
 1.7
 1.6
 1.5
 -0.6
 -1.6








33 PIN3 Auxin efflux carrier family protein 843432 At1g70940 3.3 3.0
 2.7
 29.8
 1.0
 2.4
 1.2
 4.2
 1.1
 1.0
 2.8
1.7
 1.4
1.1
 1.6
1.4
 0.6
0.0
 0.0
-0.1
 0.5
0.1
 0.6
-1.1
 0.8
-0.2
 1.0
-1.2
 1.4
0.4
 2.1
34 BHLH32 basic helix-loop-helix 32 822159 At3g25710 3.3 2.3
 3.3
 1385.1
 1.0
 0.6
 1.0
 0.8
 0.2
 2.1
 0.9
0.2
 3.2
1.7
 0.1
-0.2
 0.2
-0.2
 -0.6
-0.8
 -0.2
-0.7
 1.3
-0.4
 0.6
-0.1
 -0.1
-0.2
 0.8
-0.0
 1.8
0.4
35 MYC4 Basic helix-loop-helix (bHLH) DNA-binding family protein 827511 At4g17880 3.3 3.6
 2.0
 19.4
 1.3
 3.6
 2.7
 2.6
 1.2
 2.9
 0.2
-0.6
 0.6
-0.2
 1.7
1.6
 1.4
-0.0
 1.7
1.2
 0.2
-0.1
 2.7
0.6
 0.0
-0.6
 0.5
0.4
 1.1
1.1
 -0.0
36 PDLP3 plasmodesmata-located protein 3 817896 At2g33330 3.2 2.4
 3.3
 234.8
 0.9
 2.6
 2.5
 1.6
 2.3
 1.4
 0.9
0.4
 2.1
0.3
 1.8
0.7
 1.2
0.6
 -0.6
-0.6
 -0.4
-0.6
 1.0
0.5
 0.1
-0.2
 0.9
0.3
 0.9
0.5
 -0.3
37 AT2G23950 Leucine-rich repeat protein kinase family protein 816928 At2g23950 3.2 3.4
 2.1
 1734.0
 1.3
 1.1
 1.9
 0.8
 1.7
 0.7
 -0.9
-1.0
 0.6
-0.7
 -0.4
-1.0
 -0.0
-0.9
 -1.1
-1.3
 -0.5
-2.0
 1.2
 0.3
 -0.1
 0.6
 0.7
38 AT2G37950 RING/FYVE/PHD zinc finger superfamily protein 818372 At2g37950 3.2 3.4
 2.1
 207.5
 2.0
 2.2
 -0.1
 3.2
 1.4
 1.5
 -1.1
 -0.5








39 MYB48 myb domain protein 48 823756 At3g46130 3.2 2.8
 2.7
 624.9
 2.2
 1.4
 1.5
 2.6
 0.9
 0.5
 0.1
-1.1
 0.5
-0.5
 0.1
0.1
 -0.8
-1.0
 -0.5
-0.9
 -0.1
-0.2
 -1.1
-1.4
 0.0
-0.6
 1.5
-0.2
 -0.7
-1.0
 0.4
0.2
40 MES7 methyl esterase 7 816888 At2g23560 3.2 2.7
 2.8
 3088.1
 2.5
 1.7
 -0.4
 0.2
 -0.4
 0.1
 0.8
0.6
 1.0
0.4
 0.3
-0.1
 1.3
0.8
 1.5
0.7
 0.1
-0.2
 -0.3
-0.8
 0.7
0.3
 0.7
0.3
 0.7
0.4
 1.0
-1.7
41 AT5G54660 HSP20-like chaperones superfamily protein 835555 At5g54660 3.2 3.1
 2.4
 1965.6
 1.3
 1.0
 0.3
 1.6
 -0.3
 1.0
 -0.3
 1.3
 -0.6
 -1.6

1.0
 -0.8
 1.5
 -1.3
 0.1
42 PMI2 PLASTID MOVEMENT IMPAIRED protein (DUF827) 843002 At1g66840 3.2 3.0
 2.5
 82.2
 0.7
 2.4
 0.9
 3.7
 1.3
 2.4
 -0.6
 -0.3
 0.9
-0.0
 0.7
-0.1
 -0.6
 0.6
 -2.3
 -1.2
 -0.3
 -0.5
 -0.4
43 PME3 pectin methylesterase 3 820651 At3g14310 3.2 2.8
 2.7
 3901.7
 2.5
 0.3
 1.3
 0.9
 -1.3
 0.6
 1.5
0.7
 0.7
-0.5
 0.6
0.2
 1.3
0.1
 0.8
0.8
 0.9
0.7
 2.2
1.4
 1.5
-0.1
 0.1
-0.7
 1.1
0.5
 0.8
-0.1
44 AT5G53900 Serine/threonine-protein kinase WNK (With No Lysine)-like protein 835472 At5g53900 3.2 3.1
 2.3
 12.5
 1.4
 4.7
 1.2
 2.7
 0.5
 0.6
 0.6
 -0.8
 0.5
0.4
 0.6
0.1
 0.1
-0.9
 0.1
-0.2
 -1.1
 0.5
 -0.2
 0.3
 -0.4
45 COPT2 copper transporter 2 823843 At3g46900 3.1 3.2
 2.3
 330.6
 1.6
 2.1
 1.8
 2.4
 -0.4
 0.6
 0.0
0.0
 0.3
0.2
 0.2
-0.2
 0.5
0.1
 -1.3
 0.1
 0.1
-0.2
 -0.4
-0.6
 0.9
-1.2
 1.1
-0.1
 1.0
46 SERAT2;2 serine acetyltransferase 2;2 820499 At3g13110 3.1 2.8
 2.6
 1315.1
 2.2
 2.5
 1.7
 -0.2
 1.5
 1.4
 -0.1
 -0.4








47 VTC4 Inositol monophosphatase family protein 821206 At3g02870 3.1 2.2
 3.3
 183.8
 1.1
 2.3
 2.2
 1.3
 2.0
 0.1
 0.5
 -0.8
 -0.4
-0.7
 0.6
0.4
 0.5
0.4
 0.3
-0.2
 0.8
 0.1
 -1.5
 0.1
-0.1
 -0.8
48 AT5G20790 uncharacterized protein 832202 At5g20790 3.1 2.4
 3.0
 7582.9
 -0.6
 -0.5
 2.3
 -0.3
 0.4
 2.3
 0.7
-0.4
 -1.1
-1.4
 1.1
1.0
 1.7
1.4
 0.1
 0.0
 -0.3
-0.4
 1.1
0.3
 1.1
-0.0
 0.9
49 PAP15 purple acid phosphatase 15 819899 At3g07130 3.1 2.5
 2.9
 631.3
 0.9
 1.6
 1.7
 0.6
 1.7
 1.6
 -0.4
 -0.6
 1.3
-0.4
 0.1
-0.7
 -0.4
-0.7
 0.2
-0.6
 1.2
0.1
 0.3
-0.1
 0.8
-1.2
 -0.1
 0.8
50 STP7 sugar transporter protein 7 828154 At4g02050



















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