Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.4  AT5G56980  cotton fiber protein 
 ath-r.6  AT5G56980  cotton fiber protein 
 ath-m.9  AT5G56980  cotton fiber protein 
 ath-m.4.notissue  AT5G56980  cotton fiber protein 
 ath-m.4.tis  AT5G56980  cotton fiber protein 
 ath-m.4.str  AT5G56980  cotton fiber protein 
 ath-m.4.hor  AT5G56980  cotton fiber protein 
 ath-m.4.bio  AT5G56980  cotton fiber protein 
 ath-m.4.lig  AT5G56980  cotton fiber protein 
 ath-e.1  AT5G56980  cotton fiber protein 
 ath-u.4  AT2G26110  bromodomain protein (DUF761) 
 ath-u.4  AT4G26130  cotton fiber protein 
 gma-u.4  100775337  pathogen-associated molecular patterns-induced protein A70 
 gma-u.4  102670321  pathogen-associated molecular patterns-induced protein A70 
 gma-u.4  102664184  pathogen-associated molecular patterns-induced protein A70 
 ppo-u.4  7462259  putative cyclin-dependent serine/threonine-protein kinase DDB_G0272797/DDB_G0274007 
 ppo-u.4  7484676  uncharacterized LOC7484676 
 ppo-u.4  7476653  putative cyclin-dependent serine/threonine-protein kinase DDB_G0272797/DDB_G0274007 
 mtr-u.4  25494233  pathogen-associated molecular patterns-induced protein A70 
 mtr-u.4  25494230  pathogen-associated molecular patterns-induced protein A70 
 mtr-u.4  11411531  pathogen-associated molecular patterns-induced protein A70 
 sly-u.4  101258979  uncharacterized LOC101258979 
 sly-u.4  101244302  uncharacterized LOC101244302 
 osa-u.4  4327827  uncharacterized LOC4327827 
 osa-u.4  4341332  uncharacterized LOC4341332 
 osa-u.4  4339469  uncharacterized LOC4339469 

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Top 50 coexpressed genes to AT5G56980 (ath-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath4075   Plant hormone signal transduction  5 227 3.58
 ath592   alpha-Linolenic acid metabolism  3 39 3.89
 ath591   Linoleic acid metabolism  1 9 -
 ath400   Phenylalanine, tyrosine and tryptophan biosynthesis  1 56 -
 ath564   Glycerophospholipid metabolism  1 99 -

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ath:AT5G56980 (cotton fiber protein) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Condition specific* Reference

ath-u.4
for
AT5G56980


ath-r.6
for
AT5G56980


ath-m.9
for
AT5G56980


ath-m.4.notissue
for
AT5G56980


ath-m.4.tis
for
AT5G56980


ath-m.4.str
for
AT5G56980


ath-m.4.hor
for
AT5G56980


ath-m.4.bio
for
AT5G56980


ath-m.4.lig
for
AT5G56980


ath-e.1
for
AT5G56980


ath-u.4
for
AT2G26110


ath-u.4
for
AT4G26130


gma-u.4
for
100775337


gma-u.4
for
102670321


gma-u.4
for
102664184


ppo-u.4
for
7462259


ppo-u.4
for
7484676


ppo-u.4
for
7476653


mtr-u.4
for
25494233


mtr-u.4
for
25494230


mtr-u.4
for
11411531


sly-u.4
for
101258979


sly-u.4
for
101244302


osa-u.4
for
4327827


osa-u.4
for
4341332


osa-u.4
for
4339469

1 AT1G61890 MATE efflux family protein 842485 At1g61890 7.2 6.1
6.3
18.0
1.7
2.8
3.8
3.2
3.7
8.0
-0.3
-0.6
-0.7
-1.9














2 JAZ7 jasmonate-zim-domain protein 7 818025 At2g34600 5.9 4.0
6.3
21.9
3.3
3.4
4.0
4.1
-0.2
8.5
0.6
-0.2
-0.4
-1.0
-0.0
-1.2
1.0
0.0
-0.5
-0.6
-0.4
-0.4
-1.6
0.8
0.7
0.4
-0.1
1.1
0.8
1.4
0.6
0.6
0.2



3 ADT5 arogenate dehydratase 5 832326 At5g22630 5.7 5.3
4.7
133.8
1.0
2.0
5.1
3.2
1.5
7.0
1.5
-1.5
2.1
0.8
2.6
1.9
0.1
-0.1
1.5
1.1
0.4
-0.0
-0.5
-0.7
1.4
-0.9
1.6
-0.6
1.3
0.4
-0.4
-0.9
1.5
0.6
0.1
-0.2
1.3
1.3
2.4
1.0
0.3
0.1
4 AT1G75230 DNA glycosylase superfamily protein 843860 At1g75230 5.4 5.0
4.4
46.1
1.9
3.2
3.7
4.7
0.1
12.4
1.1
-0.4
2.3
-0.3
1.5
0.5
-0.4
-0.6
1.8
1.1
0.3
0.2
1.0
0.1
-0.6
-1.1
0.6
-0.0
-1.0
-1.5
0.2
-0.5
2.8
-0.3
1.0
-0.1
-0.2
0.8
0.4
5 AT3G16800 Protein phosphatase 2C family protein 820933 At3g16800 4.8 4.6
3.6
117.7
2.0
2.3
1.3
3.2
2.3
1.2
0.3
-0.3
3.3
0.9
1.4
1.3
0.7
0.5
1.0
0.7
2.1
1.5
-1.0
-1.8
0.6
0.3
1.2
0.3
1.8
1.0
2.0
1.8
2.3
0.1
0.5
-0.4
1.0
0.8
-0.6
6 CYP94C1 cytochrome P450, family 94, subfamily C, polypeptide 1 817315 At2g27690 4.7 3.6
4.5
30.8
1.5
3.0
2.3
3.9
0.6
7.4
-0.8
-0.5
0.7
0.5
0.5
0.3
0.7
0.2
-0.2
-1.0
-0.5
-0.6
-0.3
-0.3
0.6
0.3
0.3
0.1
2.6
0.6
0.8
-1.2
0.4
-1.3
0.4
0.0
0.9
0.9
2.3
2.2
7 AT5G05140 Transcription elongation factor (TFIIS) family protein 830396 At5g05140 4.7 4.5
3.6
328.9
2.6
2.7
1.3
2.1
1.3
5.6
0.8
0.1
-1.4
-2.3
-0.4
-1.0
0.1
-0.0
1.1
0.1
0.4
0.3
-0.3
-0.9
0.1
-1.4
0.1
-0.5
-1.5
-0.4
-0.5
-0.5
-0.6
0.0
0.3
-0.1
8 ASAT1 acyl-CoA sterol acyl transferase 1 824360 At3g51970 4.6 3.8
4.3
48.0
4.7
3.3
2.8
3.1
-0.4
2.0
-0.3
-0.5
0.7
-0.1
3.0
2.3
1.4
0.6
0.7
0.3
3.2
2.8
1.0
0.9
0.6
0.5
0.5
0.1
-0.8
-0.9
0.5
-0.3
1.0
0.9
1.0
0.7
0.9
0.7
1.6
0.8
-0.0
-0.0
9 AT5G54300 cotton fiber-like protein (DUF761) 835518 At5g54300 4.6 3.2
4.8
1.0
1.3
4.5
1.2
4.4
2.7
2.2
0.3
-0.6
-0.1
-0.7
1.7
0.7
1.0
0.7
1.4
0.7
1.7
1.6
-0.6
-1.3
0.5
0.4
1.4
0.3
0.4
-0.8
0.7
0.4
0.9
-1.3
0.6
-0.6
-0.5
0.6
2.3
10 JAZ6 jasmonate-zim-domain protein 6 843577 At1g72450 4.6 4.2
3.8
49.5
0.2
3.2
1.4
4.1
1.3
6.6
0.8
-0.1














11 CYP94B3 cytochrome P450, family 94, subfamily B, polypeptide 3 824011 At3g48520 4.6 4.2
3.7
169.6
2.6
2.5
1.0
2.4
4.3
4.0
0.0
-0.3
-0.5
-0.7






0.2
-0.4
0.3
-0.1
0.8
-0.5
0.8
0.2
0.9
0.5
-0.1
-0.3
0.7
-0.4
1.0
0.7
12 AT1G11670 MATE efflux family protein 837711 At1g11670 4.5 4.4
3.4
165.8
0.4
2.0
0.3
4.1
-1.0
4.1
-0.3
-0.6
-0.7
-1.9














13 AT1G64380 Integrase-type DNA-binding superfamily protein 842745 At1g64380 4.5 3.7
4.1
65.0
0.7
3.0
1.2
2.4
0.6
2.2
1.0
-0.3
1.0
-0.9
0.1
0.1
-1.1
-1.7
2.0
0.9
-1.4
-1.8
1.3
0.7
0.6
0.1
-1.0
0.9
-0.2
0.7
0.3
-0.1
-0.7
1.0
14 AT5G12340 DUF4228 domain protein 831109 At5g12340 4.5 4.1
3.6
38.5
3.4
2.4
1.5
4.2
1.9
7.2
-0.5
0.6
0.0
-0.1
0.5
0.2
-0.0
-0.1



0.2
0.2
0.8
-0.7
0.5
0.0
-0.4
0.5
0.3
-0.4
0.1
-0.6
1.2
0.2
15 CYP94B1 cytochrome P450, family 94, subfamily B, polypeptide 1 836464 At5g63450 4.4 3.6
4.0
13.2
2.4
3.3
3.4
4.0
0.4
4.2
0.0
-0.3
-0.5
-0.7






0.2
-0.4
0.3
-0.1
0.8
-0.5
0.8
0.2
0.9
0.5
-0.1
-0.3
0.7
-0.4
1.0
0.7
16 JAZ1 jasmonate-zim-domain protein 1 838501 At1g19180 4.4 4.4
3.2
211.5
2.1
2.2
2.5
2.3
1.6
4.5
1.0
0.4
0.6
-0.0
0.8
0.7
0.7
0.1
1.4
0.7
-0.4
-0.4
1.1
1.0
-0.2
-0.3
1.4
1.0
1.1
0.4
1.9
0.1
2.9
1.6
0.5
-0.1
0.2
-0.6
1.1
1.0
2.4
1.2
17 NAI1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 816807 At2g22770 4.3 3.5
4.0
215.9
2.3
2.5
2.8
2.3
0.1
4.5
0.9
-0.6














18 RRTF1 redox responsive transcription factor 1 829591 At4g34410 4.2 2.8
4.6
106.8
2.0
2.6
2.3
3.6
0.9
5.5
-0.4
-0.5
0.3
0.1
0.2
-0.5
-0.2
-0.4
1.3
1.2
0.2
-0.4
0.3
0.1
0.5
0.2
0.5
0.5
0.4
0.4
0.3
-0.2
1.0
0.7
0.3
-0.0
0.7
0.4
1.1
0.8
19 AT3G52800 A20/AN1-like zinc finger family protein 824446 At3g52800 4.2 3.9
3.4
76.0
1.8
3.3
1.7
2.8
1.8
0.3
0.9
0.6
1.5
0.7
0.9
0.9
2.0
2.0
0.6
-0.1
1.2
1.0
1.5
1.1
-0.4
-1.0
0.8
-0.3
-0.5
-0.6
0.0
-0.7
-0.2
-0.4
1.2
0.7
1.3
0.2
1.4
1.1
3.0
0.6
20 AT2G27310 F-box family protein 817274 At2g27310 4.2 2.7
4.5
535.1
2.2
2.3
1.6
1.8
0.4
5.5
-0.8
-1.0
2.0
0.3
1.4
0.9
1.5
0.9
0.7
0.4
2.5
0.6
0.1
-0.3
0.9
0.3
1.4
0.7
0.6
0.1
1.2
-1.6
-0.1
-0.9
0.7
-0.9
0.7
-0.1
1.3
0.7
2.0
0.4
21 TIFY10B TIFY domain/Divergent CCT motif family protein 843834 At1g74950 4.1 4.0
3.1
148.2
1.4
2.4
2.3
3.1
0.5
8.0
1.0
0.4
0.6
-0.0
0.8
0.7
0.7
0.1
1.4
0.7
-0.4
-0.4
1.1
1.0
-0.2
-0.3
1.4
1.0
1.1
0.4
1.9
0.1
2.9
1.6
0.5
-0.1
0.2
-0.6
1.1
1.0
2.4
1.2
22 MYBR1 myb domain protein r1 836865 At5g67300 4.1 3.4
3.7
90.9
2.4
2.8
1.9
3.7
4.1
2.5
1.0
0.7
1.3
0.1
0.5
0.2
1.3
0.9
2.0
1.6
2.5
1.2
1.4
1.3
1.5
1.4
0.7
0.3
-0.2
-0.8
1.5
-0.2
2.2
1.3
0.7
-0.2
1.2
0.2
0.1
-0.6
1.7
0.9
23 COBL8 COBRA-like protein 8 precursor 820941 At3g16860 4.1 3.8
3.2
150.1
2.4
2.4
0.8
2.6
1.0
4.2
1.7
0.1
1.5
0.2
0.9
-0.1
-0.5
-0.6
-0.0
-0.9
1.3
-0.4
-0.8
-2.0
1.3
-0.8
-1.1
-0.5
0.3
0.2
-0.1
0.1
-0.2
0.7
-0.0
0.6
-0.2
1.4
-0.3
24 LOX3 lipoxygenase 3 838314 At1g17420 4.1 2.8
4.2
54.3
0.6
3.1
2.0
3.2
0.3
8.4
-1.5
-1.8
0.5
-0.9
0.1
-0.2
0.7
-0.1
1.7
1.3
0.1
-0.2
1.0
-0.6
1.0
-0.4
2.2
1.0
1.1
1.0
-0.6
0.6
0.4
1.0
0.6
1.7
1.2
25 MAPKKK14 mitogen-activated protein kinase kinase kinase 14 817555 At2g30040 4.1 4.2
2.8
53.6
2.6
3.1
0.2
3.6
3.0
3.6
-0.8
-1.6
0.1
-0.2
0.0
-0.4
2.1
1.5
1.0
0.6
-0.1
-0.5
-0.1
-0.4
-0.6
-0.8
-1.0
0.5
0.9


0.1
-0.2
0.2
26 AT5G11650 alpha/beta-Hydrolases superfamily protein 831037 At5g11650 4.0 4.0
3.0
30.0
1.6
4.4
1.7
2.8
1.7
1.0
-2.1
0.2
0.8
0.7
0.4
-0.0
-0.0
-0.6
1.0
0.1
-0.2
-1.6
0.3
-0.4
-0.2
-0.1
-0.6
-0.1
-0.8
0.3
-2.1
0.2
27 MYB74 myb domain protein 74 825855 At4g05100 4.0 3.6
3.3
103.3
2.2
2.0
2.1
2.7
3.0
3.0
-0.0
-0.1
-1.1
-1.2
0.7
0.1
-0.4
-0.7
-1.0
-1.1
-0.4
1.3
-0.3
0.7
0.5
-0.4
-0.7
-0.3
-0.5


1.6
-1.4
0.4
28 AT5G53050 alpha/beta-Hydrolases superfamily protein 835385 At5g53050 4.0 4.3
2.6
46.7
0.6
2.8
2.6
5.2
0.1
5.5
-2.0
-0.2
1.0
0.1
1.2
0.4
-0.9
-1.4
1.3
0.7
-1.4
-1.6
-0.5
-1.0
-0.6
-0.3
0.3
-0.0
-0.4
-0.0
-1.0
0.1
-0.3
1.0
0.3
29 MYB95 myb domain protein 95 843784 At1g74430 4.0 3.1
3.8
64.2
-0.9
2.4
3.8
3.5
1.1
6.5
0.5
1.9














30 AT5G19230 Glycoprotein membrane precursor GPI-anchored 832043 At5g19230 3.9 4.2







3.5
2.4
0.6
2.3
0.6
1.2
0.2
0.6
0.4
0.3
0.1
1.2
-0.3
-1.0
-1.1
0.6
-0.2
1.1
0.9
0.6
0.4
-0.2
-0.2
1.4
-0.5
0.9
1.4
0.1
31 JAZ5 jasmonate-zim-domain protein 5 838310 At1g17380 3.9 3.0
3.8
38.5
0.6
3.1
2.5
3.6
0.3
6.2
-0.1
0.3














32 AOC3 allene oxide cyclase 3 822169 At3g25780 3.9 3.7
3.0
65.7
3.0
2.5
1.5
3.6
-0.1
5.8
2.5
0.0
2.1
0.4
1.5
0.8
0.5
0.1
0.6
0.2
-0.2
-1.0
0.1
-0.7
-0.0
-0.3
1.0
0.9
0.6
0.5
3.8
1.7
2.7
1.7
0.6
0.9
2.3
33 JAZ8 jasmonate-zim-domain protein 8 839893 At1g30135 3.9 2.3
4.4
50.0
2.3
3.0
3.1
2.9
-1.0
6.1
0.6
-0.2
-0.4
-1.0
-0.0
-1.2
1.0
0.0
-0.5
-0.6
-0.4
-0.4
-1.6
0.8
0.7
0.4
-0.1
1.1
0.8
1.4
0.6
0.6
0.2



34 AT5G05600 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 830443 At5g05600 3.9 2.9
3.8
304.2
2.0
2.1
2.2
2.2
1.4
5.3
1.0
0.1
0.0
-0.1
1.0
0.4
1.4
0.7
1.1
0.8
0.1
0.0
1.3
1.2
-0.8
-1.0
0.7
0.5
0.6
0.4
0.9
0.2
0.6
-0.1
1.1
0.6
0.8
0.5
1.5
0.8
0.5
0.4
35 OCT6 organic cation/carnitine transporter 6 838207 At1g16370 3.9 3.9
2.8
16.9
3.9
3.1
2.2
4.9
0.4
5.3
-0.1
-0.8
-0.4
-1.1














36 ZF2 zinc-finger protein 2 821495 At3g19580 3.8 3.9
2.7
710.6
1.2
2.2
2.5
1.4
1.8
2.9
0.8
-0.1
1.1
0.8
0.8
0.1
0.5
0.2
1.1
0.7
1.8
1.0
0.8
0.7
0.4
0.3
0.3
0.3
0.6
0.3
-0.6
-0.9
-0.1
-0.3
-0.2
-0.3
0.5
-0.4
1.6
-0.1
0.4
0.2
37 ILL6 IAA-amino acid hydrolase ILR1-like 6 841026 At1g44350 3.8 3.5
3.1
46.1
0.7
2.8
2.2
3.5
-2.5
5.6
1.1
-1.0
0.5
0.5
0.5
0.4
0.3
-1.1
0.3
0.2
-0.1
-0.8
-1.1
-2.0
0.9
-0.5
2.1
1.9
0.9
0.9
1.0
0.8
38 AT3G11420 beta-1,3-N-acetylglucosaminyltransferase lunatic protein, putative (DUF604) 820315 At3g11420 3.8 3.8
2.8
80.6
1.1
2.6
2.0
3.7
0.8
3.0
0.2
0.4
0.7
0.9
2.8
1.5
0.7
1.0
0.7
0.6
-0.5
-0.1
-0.8
-0.8
-1.0
2.8
-1.1


0.4
-0.2
1.6
-0.3
0.7
0.2
39 PNC2 peroxisomal adenine nucleotide carrier 2 832812 At5g27520 3.8 3.6
2.9
175.7
0.9
1.4
3.7
2.9
-0.1
7.2
1.0
0.8
-0.8
-1.5
-0.7
-2.3
0.1
-0.3
-0.3
-1.1
0.6
0.2
0.8
0.1
0.6
0.6
0.2
-0.5
0.3
-0.6
1.8
-1.5
0.5
-1.2
1.0
-0.5
-0.7
0.2
0.8
40 JAR1 Auxin-responsive GH3 family protein 819244 At2g46370 3.8 3.9
2.7
214.2
1.0
1.3
0.6
2.6
2.2
3.9
-0.7
1.7
0.5
0.0
0.8
0.1
1.8
1.4
0.6
0.6
0.6
-1.1
0.7
0.5
1.5
-0.7
-0.9
-1.8
0.4
-0.1
0.5
-0.2
-0.3
-0.4
-0.1
-1.0
1.1
41 CK1 choline kinase 1 843500 At1g71697 3.8 4.0
2.5
166.1
1.0
2.5
0.7
2.8
0.5
2.5
2.0
-0.2
1.6
-0.8
-0.3
-0.7
1.0
0.7
0.6
0.0
1.3
0.7
0.5
0.2
-0.4
-0.7
1.9
1.8
1.1
1.1
0.4
0.1
-1.0
-1.4
-0.4
-0.7
0.7
-0.0
2.7
0.2
42 OPCL1 OPC-8:0 CoA ligase1 838639 At1g20510 3.7 3.5
2.9
93.1
1.3
2.8
2.1
3.4
1.7
7.0
0.2
-0.2
-0.1
-0.6
0.5
0.5
0.4
-0.6
2.0
0.0
-0.3
-1.4
1.3
1.3
-1.3
0.6
-0.2
0.7
43 SCL13 SCARECROW-like 13 827435 At4g17230 3.7 3.2
3.1
315.8
2.4
2.0
2.3
2.7
1.6
5.5
-0.4
0.8
1.6
0.8
0.1
-0.1
0.5
0.4
3.1
0.1
0.2
0.1
-0.6
-1.1
0.6
-0.1
-0.6
1.9
1.2
-0.7
-0.9



44 UNE1 intracellular protein transporter, putative (DUF641) 839804 At1g29300 3.7 3.7







0.5
-0.4
-0.2
1.2
0.3
-0.3
-0.4
-0.2
-1.8
-0.4
-1.3
0.1
-0.6
1.6
1.4
-0.9
-0.8
-2.1
0.6
-1.5



45 AT1G09250 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 837446 At1g09250 3.7 3.4
2.9
146.2
1.6
2.3
2.1
3.2
2.2
2.4
2.4
1.9
2.6
0.9
3.6
3.1
1.6
1.3
0.8
0.8
2.0
0.5
0.8
-0.2
1.4
0.7
0.7
0.2
-0.0
-1.4
0.8
0.0
3.9
0.5
-0.2
-0.5
1.2
0.9
1.9
0.7
0.8
0.4
46 RAS1 RESPONSE TO ABA AND SALT 1 837529 At1g09950 3.6 2.5
3.7
292.8
1.2
1.5
0.3
4.3
0.3
3.0
-0.5
-0.0
-0.1
-0.2
0.6
-0.0
0.7
0.1



-0.8
1.1
0.3
0.5
0.3
-0.3
0.5
0.9
47 IRX15-L IRREGULAR XYLEM protein (DUF579) 836856 At5g67210 3.6 3.6
2.5
41.0
0.0
2.6
2.1
3.8
0.6
5.3
1.1
0.9
-0.1
-0.3
2.2
2.2
0.5
0.4
0.2
0.2
0.6
0.5
-0.1
-0.1
1.9
1.5
0.9
0.9
0.6
0.4
1.4
0.8
3.0
1.2
0.6
0.4
1.1
1.1
1.6
1.3
2.5
-0.1
48 GA2OX6 gibberellin 2-oxidase 6 839508 At1g02400 3.5 3.4
2.8
98.9
4.3
2.9
0.9
3.2
1.0
2.9
-1.7
-0.6
0.2
-0.9
0.6
0.3
-0.0
-1.3
-1.3
-0.5
-0.3
0.0
-0.6
1.1
-0.1
0.4
-1.3
0.1
-0.5
0.7
0.6
-0.7
0.7
0.5
49 AT4G10390 Protein kinase superfamily protein 826631 At4g10390 3.5 3.1
3.0
31.6
0.7
3.0
2.8
3.8
0.1
5.0
0.6
0.3
0.7
-1.1



0.9
-0.0
-0.4
-1.2
1.8
-0.3



0.5
-0.2
0.4
0.1
1.1
0.9
2.2
1.4
1.2
0.5
50 RD26 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein 828849 At4g27410 3.5 3.0
3.0
428.2
2.1
1.8
3.7
2.4
3.1
3.8
















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