cis; CAGCATG

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CAGCATG

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CAGCATG.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
-0.41At1g04990zinc finger (CCCH-type) family protein C2H2

link to other 304 cis elements in ATTED

similar seq.
←CAGCATG→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CATGCTG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CAGCATG1.000.079
CTCCGCG0.730.07100
CCGTGGG0.690.06171
ACTCCGC0.680.08117
GCGTTCG0.670.0794
CGCGTTC0.660.06177
CATGCTC0.660.0844
CCGAGCG0.630.08107
CACTCCA0.630.064
TCCGCGT0.620.07156