cis; CCTGGGG

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CCTGGGG

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CCTGGGG.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.51At1g28050zinc finger (B-box type) family protein C2C2-CO-like
0.49At5g48250zinc finger (B-box type) family protein C2C2-CO-like
0.46At1g49720ABA-responsive element-binding protein / abscisic acid responsive elements-binding factor (ABRE) ((ABF1)) bZIP
0.45At3g07650zinc finger (B-box type) family protein C2C2-CO-like
-0.43At1g73870zinc finger (B-box type) family protein C2C2-CO-like
0.42At3g46640myb family transcription factor G2-like
-0.41At1g01060myb family transcription factor ((LHY)) MYB-related

link to other 304 cis elements in ATTED

similar seq.
←CCTGGGG→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CCCCAGG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CCTGGGG1.000.0841
CTCGGTG0.610.0796