cis; CTCTGGA

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CTCTGGA

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CTCTGGA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.46At1g17460myb family transcription factor MYB-related
0.45At2g26150heat shock transcription factor family protein ((ATHSFA2)) HSF
0.44At5g22480zinc finger (ZPR1-type) family protein C2H2

link to other 304 cis elements in ATTED

similar seq.
←CTCTGGA→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TCCAGAG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CTCTGGA1.000.0871
TCTAGAA0.860.1580
TCTGGAA0.830.0720
TTCTAGA0.800.1188
CTCTAGA0.800.1083
CTTCTAG0.800.1090
CTCCAGA0.780.0754
CCCTGGG0.780.06113
GCGAAGG0.750.0979
TTCTGGA0.750.0782