cis; GCGTATG

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of GCGTATG

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of GCGTATG.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.53At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.53At5g47230ethylene-responsive element-binding factor 5 (ERF5) ((ATERF5)) AP2-EREBP
0.52At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.52At4g01250WRKY family transcription factor ((WRKY22)) WRKY
0.51At4g17490ethylene-responsive element-binding protein, putative ((ATERF6, ERF-6-6)) AP2-EREBP
0.50At5g66070zinc finger (C3HC4-type RING finger) family protein C3H
0.50At3g49530no apical meristem (NAM) family protein NAC
0.50At2g23320WRKY family transcription factor ((WRKY15)) WRKY
0.49At1g21910AP2 domain-containing transcription factor family protein AP2-EREBP
0.48At5g51190AP2 domain-containing transcription factor, putative AP2-EREBP
0.48At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.47At3g54810zinc finger (GATA type) family protein C2C2-Gata
0.47At4g31550WRKY family transcription factor ((WRKY11)) WRKY
0.47At4g31800WRKY family transcription factor ((WRKY18)) WRKY
0.47At1g27730zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) ((ZAT10)) C2H2

link to other 304 cis elements in ATTED

similar seq.
←GCGTATG→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CATACGC
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
GCGTATG1.000.0653
ACCGCGT0.880.1098
TTACGCG0.880.07194
CGCGTTT0.870.1193
AACCGCG0.870.0985
ATACGCG0.870.0639
ACGCGTT0.850.1096
AACGCGT0.850.10127
ACGCGGT0.840.09141
CCTTCCT0.840.0648