cis; GTCGACA

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
GTCGAC  CDTDREHVCBF2 [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of GTCGACA

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of GTCGACA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.44At4g32800AP2 domain-containing transcription factor TINY, putative AP2-EREBP

link to other 304 cis elements in ATTED

similar seq.
←GTCGACA→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TGTCGAC
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
GTCGACA1.000.08171
TGTCGAC0.890.08160
ACCGTGT0.670.07144
TGCCGAC0.640.0830
TAACGCG0.620.0762
ACGCGTA0.620.1074
TGTCGGC0.620.06163
GCCGACA0.610.08121
TATATAT0.610.1026
TTCTATA0.610.0630