cis; GTCGGCA

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of GTCGGCA

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of GTCGGCA.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.55At2g23340AP2 domain-containing transcription factor, putative AP2-EREBP
0.48At1g76580SPL1-Related3 protein (SPL1R3) SBP
0.44At2g22900galactosyl transferase GMA12/MNN10 family protein CAMTA

link to other 304 cis elements in ATTED

similar seq.
←GTCGGCA→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; TGCCGAC
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
GTCGGCA1.000.07186
TGTCGGC0.750.06163
GCCGACA0.690.08121
CCGACAT0.650.0788
ATGTCGG0.630.07111
TGCCGAC0.620.0830
TGTCGAC0.610.08160
GGCCGAC0.600.07143