cis; GTCGGTC


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of GTCGGTC

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of GTCGGTC.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.57At4g27410no apical meristem (NAM) family protein (RD26) ((RD26)) NAC
0.54At5g01380expressed protein Trihelix
0.54At4g05100myb family transcription factor (MYB74) MYB
0.53At4g36900AP2 domain-containing protein RAP2.10 (RAP2.10) AP2-EREBP
0.53At5g04340zinc finger (C2H2 type) family protein ((C2H2)) C2H2
0.51At1g76580SPL1-Related3 protein (SPL1R3) SBP
0.50At2g23340AP2 domain-containing transcription factor, putative AP2-EREBP
0.49At3g15210ethylene-responsive element-binding factor 4 (ERF4) ((ATERF4, RAP2.5)) AP2-EREBP
0.49At3g01560proline-rich family protein Trihelix
0.49At1g43160AP2 domain-containing protein RAP2.6 (RAP2.6) AP2-EREBP
-0.49At3g04450myb family transcription factor G2-like
0.48At2g16720myb family transcription factor ((ATMYB7, MYB7)) MYB
0.48At1g77450no apical meristem (NAM) family protein NAC
0.47At1g01720no apical meristem (NAM) family protein ((ATAF1)) NAC
0.46At5g24590turnip crinkle virus-interacting protein / TCV-interacting protein (TIP) ((TIP)) NAC

link to other 304 cis elements in ATTED

similar seq.
GTCGGTC
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; GACCGAC
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
GTCGGTC1.000.07175
ATGTCGG0.810.07111
TGCCGAC0.800.0830
GCCGACA0.790.08121
CACCGAC0.780.07198
CACGCGT0.770.0774
CCGACAT0.760.0788
AGACACG0.740.07112
TTACACG0.730.06113
ACGTGTA0.720.0682