cis; TTGCATG

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
TTGCATGACT SORLREP5AT [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TTGCATG

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TTGCATG.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.53At1g69570Dof-type zinc finger domain-containing protein C2C2-Dof
0.52At3g15510no apical meristem (NAM) family protein (NAC2) ((ATNAC2)) NAC
0.52At5g04340zinc finger (C2H2 type) family protein ((C2H2)) C2H2
-0.52At5g64340expressed protein BHLH
0.51At3g19580zinc finger (C2H2 type) protein 2 (AZF2) ((AZF2)) C2H2
-0.51At4g3093050S ribosomal protein L21, mitochondrial (RPL21M) ((WRKY32)) WRKY
-0.51At5g16070chaperonin, putative TCP
0.49At5g55970zinc finger (C3HC4-type RING finger) family protein C3H
0.49At4g27410no apical meristem (NAM) family protein (RD26) ((RD26)) NAC
-0.49At3g16870zinc finger (GATA type) family protein C2C2-Gata
0.48At3g15500no apical meristem (NAM) family protein (NAC3) ((ATNAC3)) NAC
0.48At1g22190AP2 domain-containing transcription factor, putative AP2-EREBP
0.48At3g26790transcriptional regulator (FUSCA3) ((FUS3)) ABI3VP1
-0.47At1g71260expressed protein WHIRLY
0.47At1g27730zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) ((ZAT10)) C2H2

link to other 304 cis elements in ATTED

similar seq.
←TTGCATG→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; CATGCAA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TTGCATG1.000.0674
GCATGAC0.650.0879
GCATGCA0.600.0650