[←][→] vvi   VIT_00015721001 Gene
functional annotation
Function   protein PAT1 homolog 1  
GO BP
GO CC
GO MF
KEGG vvi03018 [list] [network] RNA degradation (104 genes)
Protein XP_002264820.1 
BLAST XP_002264820.1 
Orthologous [Ortholog page] AT3G22270 (ath)  AT4G14990 (ath)  AT1G79090 (ath)  LOC4325594 (osa)  LOC4329480 (osa)  LOC7454988 (ppo)  LOC7480371 (ppo)  LOC7495641 (ppo)  LOC25487016 (mtr)  LOC25487017 (mtr)  LOC100267869 (vvi)  LOC100272651 (zma)  LOC100779096 (gma)  LOC100787112 (gma)  LOC100787648 (gma)  LOC100805313 (gma)  LOC100812450 (gma)  LOC101253667 (sly)  LOC101257075 (sly)  LOC101260608 (sly)  LOC103630586 (zma)  LOC103830497 (bra)  LOC103832387 (bra)  LOC103834665 (bra)  LOC103869095 (bra)  LOC103871463 (bra)  LOC103872452 (bra) 
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for XP_002264820.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002264820.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 3
vvi03018 RNA degradation 3
vvi04141 Protein processing in endoplasmic reticulum 2
Genes directly connected with LOC100255521 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.6 LOC100247152 ARF guanine-nucleotide exchange factor GNOM [detail] 100247152
9.1 LOC100249377 AP-4 complex subunit epsilon [detail] 100249377
8.9 LOC100854676 actin cytoskeleton-regulatory complex protein PAN1 [detail] 100854676
8.6 LOC100267869 protein PAT1 homolog 1 [detail] 100267869
7.2 LOC100252496 CCR4-NOT transcription complex subunit 10 [detail] 100252496
7.0 LOC100265203 uncharacterized LOC100265203 [detail] 100265203
6.5 LOC104880267 zinc finger BED domain-containing protein DAYSLEEPER-like [detail] 104880267
6.2 LOC100260740 DIS3-like exonuclease 2 [detail] 100260740
5.3 LOC100264649 BTB/POZ domain-containing protein At1g04390 [detail] 100264649
Coexpressed
gene list		 [Coexpressed gene list for LOC100255521]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100255521      
Refseq ID (protein) XP_002264820.1 


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